RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 TEX44Q53QW1 395 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ARTNQ5T4W7 220 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 STXBP5Q5T5C0 1151 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 FAM72AQ5TYM5 149 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TTC39BQ5VTQ0 682 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 C1orf53Q5VUE5 145 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 BTBD8Q5XKL5 378 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 AFMIDQ63HM1 303 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ITPRIPL1Q6GPH6 555 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 FAM72DQ6L9T8 149 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ANKRD33Q7Z3H0 272 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 FAM72BQ86X60 149 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 CCDC117Q8IWD4 279 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 LRRC34Q8IZ02 419 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ZNF567Q8N184 647 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 AGGF1Q8N302 714 aaeCLIP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 GBP7Q8N8V2 638 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 BANPQ8N9N5 519 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ZSCAN18Q8TBC5 510 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 SPPL2BQ8TCT7 592 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 DYDC1Q8WWB3 177 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 SLC39A13Q96H72 371 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 CABS1Q96KC9 395 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TOX2Q96NM4 488 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 SERPINB11Q96P15 392 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 CASD1Q96PB1 797 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 LGMNQ99538 433 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 MAGEB5Q9BZ81 275 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 CATSPERBQ9H7T0 1116 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ACTR5Q9H9F9 607 aaPredicted RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 PLAC1Q9HBJ0 212 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 KCNK9Q9NPC2 374 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ANLNQ9NQW6 1124 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 OLA1Q9NTK5 396 aaKnown RBP7.83□□□□□ -1.16
COL6A3-208ENST00000468792 SAMD15Q9P1V8 674 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 HSFX1Q9UBD0 423 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TBK1Q9UHD2 729 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 ADAM28Q9UKQ2 775 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 OGDHLQ9ULD0 1010 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 CHMP2BQ9UQN3 213 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TLR6Q9Y2C9 796 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TTLL3Q9Y4R7 772 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 PCDHB7Q9Y5E2 793 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 PCDHB5Q9Y5E4 795 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 PCDHA11Q9Y5I1 949 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 IKBKGQ9Y6K9 419 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 TTC3P53804 2025 aa7.83□□□□□ -1.16
COL6A3-208ENST00000468792 H7C4K7 107 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 I3L4J1 428 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KLF11O14901 512 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 B4GALT3O60512 393 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 TADA2AO75478 443 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 BANF1O75531 89 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KRT38O76015 456 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 CPP00450 1065 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 MT-ND3P03897 115 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 GSTA1P08263 222 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 SNRPAP09012 282 aaKnown RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 DHRS4L1P0CG22 281 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ALADP13716 330 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 PGAM1P18669 254 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KRT4P19013 534 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 TAC1P20366 129 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 PTPN3P26045 913 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 GRIK1P39086 918 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 CCNFP41002 786 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 MAGEA9P43362 315 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 OR1G1P47890 313 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 NPY2RP49146 381 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 PLXNA3P51805 1871 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KPNA1P52294 538 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 NRLP54845 237 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 MLLT6P55198 1093 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 TNK2Q07912 1038 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 AP1B1Q10567 949 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 IFRD2Q12894 506 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 MTFR1Q15390 333 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 QPCTQ16769 361 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KBTBD12Q3ZCT8 623 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 SPDYAQ5MJ70 313 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 VARS2Q5ST30 1063 aaKnown RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 KCTD11Q693B1 232 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ZNF280DQ6N043 979 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 UNC5AQ6ZN44 842 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 MARK2Q7KZI7 788 aaKnown RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 SCD5Q86SK9 330 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 CHSY1Q86X52 802 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 NPAS4Q8IUM7 802 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ABI1Q8IZP0 508 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ZNF398Q8TD17 642 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ACMSDQ8TDX5 336 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 ZNF296Q8WUU4 475 aaPredicted RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 STAMBPL1Q96FJ0 436 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 TEKT5Q96M29 485 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 TMEM209Q96SK2 561 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 CDK5RAP1Q96SZ6 601 aaKnown RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 GBA3Q9H227 469 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 CASS4Q9NQ75 786 aa7.82□□□□□ -1.16
COL6A3-208ENST00000468792 PPARGC1AQ9UBK2 798 aaKnown RBP7.82□□□□□ -1.16
COL6A3-208ENST00000468792 PRKAG3Q9UGI9 489 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms