RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
PTPN7-207ENST00000468385 COQ4Q9Y3A0 265 aa13.59□□□□□ -0.23
PTPN7-207ENST00000468385 COL5A1P20908 1838 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-207ENST00000468385 GOLGA4Q13439 2230 aaKnown RBP13.59□□□□□ -0.23
PTPN7-207ENST00000468385 A0A1W2PP55 124 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 EIF4E1BA6NMX2 242 aaKnown RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 ENC1O14682 589 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 WNT9AO14904 365 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 MID1O15344 667 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 IRAK2O43187 625 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 EPB41P11171 864 aaKnown RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 VDRP11473 427 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 CSKP41240 450 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 ABCG1P45844 678 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 DNAJC3Q13217 504 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 CST6Q15828 149 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 NUGGCQ68CJ6 796 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 NADSYN1Q6IA69 706 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 NCEH1Q6PIU2 408 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 KRBA2Q6ZNG9 492 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 UNC45BQ8IWX7 931 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 ZNF557Q8N988 423 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 SAP25Q8TEE9 199 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 GANCQ8TET4 914 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 AZIN2Q96A70 460 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 CNDP2Q96KP4 475 aaKnown RBP13.58□□□□□ -0.24
PTPN7-207ENST00000468385 DCBLD2Q96PD2 775 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 NEUROG2Q9H2A3 272 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 STIM2Q9P246 746 aa13.58□□□□□ -0.24
PTPN7-207ENST00000468385 A0A1W2PR77 199 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 PIK3R2O00459 728 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 CETN3O15182 167 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 LDOC1O95751 146 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ASLP04424 464 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ITGAVP06756 1048 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 SLC11A2P49281 568 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 RGS7P49802 495 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 TBX4P57082 545 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ST8SIA6P61647 398 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 KCNJ12Q14500 433 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ARID5BQ14865 1188 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 DCAF17Q5H9S7 520 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-207ENST00000468385 C9orf64Q5T6V5 341 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 PMF1Q6P1K2 205 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 LCLAT1Q6UWP7 414 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 KDM1BQ8NB78 822 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 HJURPQ8NCD3 748 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-207ENST00000468385 OR2T34Q8NGX1 318 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 PIP4K2CQ8TBX8 421 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ADAM32Q8TC27 787 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 CLEC4CQ8WTT0 213 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 SLC35F5Q8WV83 523 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 IRGQQ8WZA9 623 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 TFAP2BQ92481 460 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 SKA1Q96BD8 255 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 NXPE2Q96DL1 559 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 SPATA32Q96LK8 384 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 ADAMTS1Q9UHI8 967 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
PTPN7-207ENST00000468385 TP53BP1Q12888 1972 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-207ENST00000468385 BPTFQ12830 3046 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 TARSL2A2RTX5 802 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 LRRC72A6NJI9 287 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 TTC34A8MYJ7 566 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 TLX3O43711 291 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 RNASEH1O60930 286 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 RFPL3O75679 317 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 RNASEH2AO75792 299 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 LTFP02788 710 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 HSP90AA1P07900 732 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 C1SP09871 688 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 JUPP14923 745 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 ABCB4P21439 1286 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 ITPKBP27987 946 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 CD38P28907 300 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 EPHA8P29322 1005 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 CTSOP43234 321 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 ACADVLP49748 655 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 YWHAEP62258 255 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 RPS24P62847 133 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 TCERG1LQ5VWI1 586 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 MMS22LQ6ZRQ5 1243 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 MMAAQ8IVH4 418 aaKnown RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 HSCBQ8IWL3 235 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 CARNMT1Q8N4J0 409 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 FCRL2Q96LA5 508 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 UBL7Q96S82 380 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-207ENST00000468385 FAM129BQ96TA1 746 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 OMDQ99983 421 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 ZSWIM1Q9BR11 485 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 GOLPH3LQ9H4A5 285 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 AASDHPPTQ9NRN7 309 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 FZD4Q9ULV1 537 aa13.56□□□□□ -0.24
PTPN7-207ENST00000468385 ERVW-1Q9UQF0 538 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms