RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 UNGP13051 313 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 NOS2P35228 1153 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 STAT1P42224 750 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 SGSHP51688 502 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 CDK17Q00537 523 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ZC3H12AQ5D1E8 599 aaKnown RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 MS4A13Q5J8X5 152 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 OTUD1Q5VV17 481 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 TAF3Q5VWG9 929 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 RFWD3Q6PCD5 774 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 VASH1Q7L8A9 365 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ARCQ7LC44 396 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ANKS1BQ7Z6G8 1248 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ERICH1Q86X53 443 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 XYLT1Q86Y38 959 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 DCLK2Q8N568 766 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 NEK11Q8NG66 645 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 SLC20A1Q8WUM9 679 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 MYEOVQ96EZ4 313 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 PGAP3Q96FM1 320 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 LOXL4Q96JB6 756 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 BTN2A3PQ96KV6 586 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 PRICKLE1Q96MT3 831 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 SPAG5Q96R06 1193 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 NPY6RQ99463 290 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 PRMT1Q99873 361 aaKnown RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 DDX50Q9BQ39 737 aaKnown RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 NUCKS1Q9H1E3 243 aaKnown RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 POLMQ9NP87 494 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 ELOVL2Q9NXB9 296 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 RRN3Q9NYV6 651 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 THAP10Q9P2Z0 257 aaPredicted RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 XPO7Q9UIA9 1087 aaKnown RBP11.56□□□□□ -0.56
COL4A6-205ENST00000468338 TMEM59LQ9UK28 342 aa11.56□□□□□ -0.56
COL4A6-205ENST00000468338 WDR87Q6ZQQ6 2873 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 SYCE3A1L190 88 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 TSPAN3O60637 253 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 LRP3O75074 770 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 GRAP2O75791 330 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 CAVIN2O95810 425 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 RETP07949 1114 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 SLC2A3P11169 496 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 MMP8P22894 467 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 MATKP42679 507 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 NR1I3Q14994 352 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 PLK5Q496M5 336 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 ANO7Q6IWH7 933 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 TRIM72Q6ZMU5 477 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 CACNA2D4Q7Z3S7 1137 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 BNIPLQ7Z465 357 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 ADIPOR2Q86V24 386 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 CHPFQ8IZ52 775 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 ZNF557Q8N988 423 aaPredicted RBP11.55□□□□□ -0.56
COL4A6-205ENST00000468338 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 PCDHB18PQ96TA0 734 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 PDCL3Q9H2J4 239 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 SYNCQ9H7C4 482 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 TMEM51Q9NW97 253 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 DDIT4Q9NX09 232 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 CALCOCO1Q9P1Z2 691 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 MYO6Q9UM54 1294 aa11.55□□□□□ -0.56
COL4A6-205ENST00000468338 THADAQ6YHU6 1953 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 A0A1W2PQC6 194 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 ALDH1A2O94788 518 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 APOEP02649 317 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 HOXB2P14652 356 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 GABRG2P18507 467 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 CCR1P32246 355 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 GBP1P32455 592 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 CXCR3P49682 368 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 RPS24P62847 133 aaKnown RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 PTP4A2Q12974 167 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 MTA1Q13330 715 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 ZNF211Q13398 564 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 E2F5Q15329 346 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 C5orf22Q49AR2 442 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 USP39Q53GS9 565 aaKnown RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 NAA35Q5VZE5 725 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 TRNP1Q6NT89 227 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 KIAA1211LQ6NV74 962 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 PRR23BQ6ZRT6 265 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 IRF2BP2Q7Z5L9 587 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 KBTBD6Q86V97 674 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 GPR161Q8N6U8 529 aaKnown RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 HJURPQ8NCD3 748 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 TSEN2Q8NCE0 465 aaKnown RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 WFDC5Q8TCV5 224 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 WFIKKN2Q8TEU8 576 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 UCMAQ8WVF2 138 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 CPA5Q8WXQ8 436 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 NAP1L5Q96NT1 182 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 SYT11Q9BT88 431 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 DUSP15Q9H1R2 295 aaPredicted RBP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 CBX8Q9HC52 389 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 CACNA2D2Q9NY47 1150 aa11.54□□□□□ -0.56
COL4A6-205ENST00000468338 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
COL4A6-205ENST00000468338 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms