RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 CACNA1GO43497 2377 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 FAM221BA6H8Z2 402 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 CBFA2T3O75081 653 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 AFPP02771 609 aaKnown RBP21.84■■□□□ 1.09
COL9A3-207ENST00000467819 ZNF883P0CG24 379 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 GPD2P43304 727 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 CDH18Q13634 790 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 MORC3Q14149 939 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 LAYNQ6UX15 382 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 MMS22LQ6ZRQ5 1243 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 CCDC117Q8IWD4 279 aaPredicted RBP21.84■■□□□ 1.09
COL9A3-207ENST00000467819 CFAP52Q8N1V2 620 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 GANCQ8TET4 914 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 TTC17Q96AE7 1141 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 BIRC7Q96CA5 298 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 TM9SF3Q9HD45 589 aa21.84■■□□□ 1.09
COL9A3-207ENST00000467819 INTS6Q9UL03 887 aaKnown RBP21.84■■□□□ 1.09
COL9A3-207ENST00000467819 FREM2Q5SZK8 3169 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 CAPN9O14815 690 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SART1O43290 800 aaKnown RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SIN3BO75182 1162 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 GNA14O95837 355 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 C7P10643 843 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 ACADSBP45954 432 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 PAK1Q13153 545 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 NNTQ13423 1086 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 TEAD4Q15561 434 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 KIF19Q2TAC6 998 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 DCAF6Q58WW2 860 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 FSCBQ5H9T9 825 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 MS4A13Q5J8X5 152 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SYPL2Q5VXT5 272 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 FOXR2Q6PJQ5 311 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 DHX40Q8IX18 779 aaKnown RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SLC39A13Q96H72 371 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SRRTQ9BXP5 876 aaKnown RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 RSPH9Q9H1X1 276 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SGK2Q9HBY8 427 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 UBE2TQ9NPD8 197 aaPredicted RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 XPO7Q9UIA9 1087 aaKnown RBP21.83■■□□□ 1.09
COL9A3-207ENST00000467819 SNX11Q9Y5W9 270 aa21.83■■□□□ 1.09
COL9A3-207ENST00000467819 LETM1O95202 739 aaPredicted RBP21.82■■□□□ 1.08
COL9A3-207ENST00000467819 ASLP04424 464 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 RPL34P49207 117 aaKnown RBP21.82■■□□□ 1.08
COL9A3-207ENST00000467819 PITRM1Q5JRX3 1037 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 GLRX5Q86SX6 157 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 SLCO6A1Q86UG4 719 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 LGI2Q8N0V4 545 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 RHBDD1Q8TEB9 315 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 MRGPRX3Q96LB0 322 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 PABPC3Q9H361 631 aaKnown RBP21.82■■□□□ 1.08
COL9A3-207ENST00000467819 CYTH4Q9UIA0 394 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 CNTN6Q9UQ52 1028 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 NCKAP1Q9Y2A7 1128 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 ANKRD6Q9Y2G4 727 aa21.82■■□□□ 1.08
COL9A3-207ENST00000467819 GOLGA4Q13439 2230 aaKnown RBP21.82■■□□□ 1.08
COL9A3-207ENST00000467819 FAM47DPA6NHR8 397 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 E5RJQ4 531 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 FLRT2O43155 660 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 THAP12O43422 761 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 RNASEH1O60930 286 aaKnown RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 GADD45BO75293 160 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 LUC7L3O95232 432 aaKnown RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 APOEP02649 317 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 CD27P26842 260 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 CTSOP43234 321 aaPredicted RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 GRIA4P48058 902 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 MARSP56192 900 aaKnown RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 HNRNPA1L2Q32P51 320 aaKnown RBP21.81■■□□□ 1.08
COL9A3-207ENST00000467819 RAP1GAP2Q684P5 730 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 CHSY1Q86X52 802 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 SLC4A5Q9BY07 1137 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 OSGEPQ9NPF4 335 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 ACP6Q9NPH0 428 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 FBXL12Q9NXK8 326 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 ERVW-1Q9UQF0 538 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 BTBD3Q9Y2F9 522 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 CEP83Q9Y592 693 aa21.81■■□□□ 1.08
COL9A3-207ENST00000467819 GOLGA8CPA6NN73 597 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 KCNK3O14649 394 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 MID1O15344 667 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 PAPSS1O43252 624 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-207ENST00000467819 MED7O43513 233 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 GNA15P30679 374 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 NUMBP49757 651 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 ZC3H12AQ5D1E8 599 aaKnown RBP21.8■■□□□ 1.08
COL9A3-207ENST00000467819 ADAT2Q7Z6V5 191 aaKnown RBP21.8■■□□□ 1.08
COL9A3-207ENST00000467819 BAHD1Q8TBE0 780 aaPredicted RBP21.8■■□□□ 1.08
COL9A3-207ENST00000467819 ZNF606Q8WXB4 792 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 TRIM62Q9BVG3 475 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 TJP2Q9UDY2 1190 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 SERGEFQ9UGK8 458 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 PCDHGB2Q9Y5G2 931 aa21.8■■□□□ 1.08
COL9A3-207ENST00000467819 A0A1W2PP55 124 aa21.79■■□□□ 1.08
COL9A3-207ENST00000467819 TTC34A8MYJ7 566 aa21.79■■□□□ 1.08
COL9A3-207ENST00000467819 MOCS3O95396 460 aa21.79■■□□□ 1.08
COL9A3-207ENST00000467819 TRUB2O95900 331 aaKnown RBP21.79■■□□□ 1.08
COL9A3-207ENST00000467819 IGHV4-34P06331 123 aa21.79■■□□□ 1.08
COL9A3-207ENST00000467819 TACR2P21452 398 aa21.79■■□□□ 1.08
COL9A3-207ENST00000467819 PITX1P78337 314 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms