RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 DEFB119Q8N690 84 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 ALLCQ8N6M5 410 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 ANKRD52Q8NB46 1076 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 TXNDC5Q8NBS9 432 aaKnown RBP11.47□□□□□ -0.57
PRPF3-203ENST00000467514 B3GALNT2Q8NCR0 500 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 C3orf20Q8ND61 904 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 COG1Q8WTW3 980 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 EZH1Q92800 747 aaPredicted RBP11.47□□□□□ -0.57
PRPF3-203ENST00000467514 TNIP3Q96KP6 325 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 CARD6Q9BX69 1037 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 CRTAC1Q9NQ79 661 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 FAM49BQ9NUQ9 324 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 TMEM74BQ9NUR3 256 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 PARVAQ9NVD7 372 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 TJP2Q9UDY2 1190 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 STRIP2Q9ULQ0 834 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 SCINQ9Y6U3 715 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 FLNBO75369 2602 aaKnown RBP11.47□□□□□ -0.57
PRPF3-203ENST00000467514 LAMA5O15230 3695 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 MYH10P35580 1976 aa11.47□□□□□ -0.57
PRPF3-203ENST00000467514 HELZP42694 1942 aaKnown RBP11.47□□□□□ -0.57
PRPF3-203ENST00000467514 UPK3BL1B0FP48 263 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 UPK3BL2E5RIL1 263 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 TULP2O00295 520 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 ZNF185O15231 689 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 ATP2C2O75185 946 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 PROSCO94903 275 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 ERBB2P04626 1255 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 APODP05090 189 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 CCDC130P13994 396 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 COMTP21964 271 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 CTNNA2P26232 953 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 MAN1A1P33908 653 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 HOXD12P35452 270 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 GPR15P49685 360 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 RPL10AP62906 217 aaKnown RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 FAM193AP78312 1265 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 MRPS21P82921 87 aaKnown RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 PDE4CQ08493 712 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 USP4Q13107 963 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 ZNF77Q15935 545 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 EML3Q32P44 896 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 EOGTQ5NDL2 527 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 RAB44Q7Z6P3 723 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 TMEM110Q86TL2 294 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 RGL4Q8IZJ4 473 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 PNPLA1Q8N8W4 532 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 RIN3Q8TB24 985 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 UBA3Q8TBC4 463 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 MDM1Q8TC05 714 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 CYP2S1Q96SQ9 504 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 SYT15Q9BQS2 421 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 DNAI2Q9GZS0 605 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 MRPL47Q9HD33 250 aaKnown RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 CYLDQ9NQC7 956 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 ANAPC7Q9UJX3 599 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 AMFRQ9UKV5 643 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 CDH9Q9ULB4 789 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 PACSIN2Q9UNF0 486 aaPredicted RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 APOBEC2Q9Y235 224 aaKnown RBP11.46□□□□□ -0.57
PRPF3-203ENST00000467514 RAXQ9Y2V3 346 aa11.46□□□□□ -0.57
PRPF3-203ENST00000467514 PTPRDP23468 1912 aa11.46□□□□□ -0.58
PRPF3-203ENST00000467514 ACACAQ13085 2346 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SIGLEC16A6NMB1 481 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 MIF4GDA9UHW6 222 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 GJB6O95452 261 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SERPINF2P08697 491 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 FTH1P19P0C7X4 201 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 ACAT1P24752 427 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 PCSK1P29120 753 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 PEX5P50542 639 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 BCAT1P54687 386 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 PSMC1P62191 440 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 RPL7AP62424 266 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 OGDHQ02218 1023 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 KDSRQ06136 332 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 C19orf57Q0VDD7 668 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 BST2Q10589 180 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 MESDQ14696 234 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 NFE2Q16621 373 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SPDYCQ5MJ68 293 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 PMF1Q6P1K2 205 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 DNAJC24Q6P3W2 148 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 FAM171BQ6P995 826 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SLC36A4Q6YBV0 504 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 RSRC2Q7L4I2 434 aaKnown RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 TMEM150AQ86TG1 271 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SCN4BQ8IWT1 228 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 FRMD1Q8N878 549 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 CEP112Q8N8E3 955 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 NIPA2Q8N8Q9 360 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 ARL14EPQ8N8R7 260 aaPredicted RBP11.45□□□□□ -0.58
PRPF3-203ENST00000467514 OR2I1PQ8NGU4 316 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 MYCBPAPQ8TBZ2 947 aa11.45□□□□□ -0.58
PRPF3-203ENST00000467514 SLC2A14Q8TDB8 520 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms