RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 M0QZQ0 153 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 B4GALT3O60512 393 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 USP12O75317 370 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 MLNP12872 115 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 BGNP21810 368 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 PTPN3P26045 913 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ELF1P32519 619 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 CXCR3P49682 368 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 IFRD2Q12894 506 aaPredicted RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 GRIK3Q13003 919 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ITGA7Q13683 1181 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ARL13BQ3SXY8 428 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 LGSNQ5TDP6 509 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 NAIF1Q69YI7 327 aaPredicted RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 OVOS1Q6IE37 1185 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 KIF2BQ8N4N8 673 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 GORASP1Q9BQQ3 440 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 IL1RAPL1Q9NZN1 696 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 KRT38O76015 456 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 LRIG2O94898 1065 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 F9P00740 461 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 EPHB2P29323 1055 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 HCAR3P49019 387 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 PGFP49763 221 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ELF3P78545 371 aaPredicted RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 TRIM71Q2Q1W2 868 aaKnown RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 ACCSLQ4AC99 568 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 CES3Q6UWW8 571 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ERP27Q96DN0 273 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 DMAP1Q9NPF5 467 aaPredicted RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 EIF2B3Q9NR50 452 aaKnown RBP11.74□□□□□ -0.53
HPS1-208ENST00000467246 SYBUQ9NX95 663 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 IGSF9Q9P2J2 1179 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 DCTN4Q9UJW0 460 aa11.74□□□□□ -0.53
HPS1-208ENST00000467246 ALDH1A2O94788 518 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 TOP3BO95985 862 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 RPLP2P05387 115 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 NEFHP12036 1026 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SERPINB4P48594 390 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 STEAP4Q687X5 459 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 RFWD2Q8NHY2 731 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 DQX1Q8TE96 717 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 RNF34Q969K3 372 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 LRRC37BQ96QE4 947 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 MECRQ9BV79 373 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 IQCGQ9H095 443 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 PCMTD2Q9NV79 361 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 NUP205Q92621 2012 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 ZBTB24O43167 697 aaPredicted RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 OR4Q2P0C623 313 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 CRYMQ14894 314 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 PDZD4Q76G19 769 aaPredicted RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 ZNF280BQ86YH2 543 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 OR52K1Q8NGK4 314 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 IRGQQ8WZA9 623 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 MIEF2Q96C03 454 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 KLHL29Q96CT2 875 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 CELF6Q96J87 481 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 TSSK1BQ9BXA7 367 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 RRN3Q9NYV6 651 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 KANSL3Q9P2N6 904 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 PLLPQ9Y342 182 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 MRPL42Q9Y6G3 142 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 NUMBLQ9Y6R0 609 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 CD68P34810 354 aaPredicted RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 PPIDQ08752 370 aaKnown RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 ZBTB17Q13105 803 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SETDB1Q15047 1291 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 CYS1Q717R9 158 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 PARP9Q8IXQ6 854 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 NDUFAF2Q8N183 169 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 ARMC2Q8NEN0 867 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SUSD3Q96L08 255 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 SIK2Q9H0K1 926 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 MCM8Q9UJA3 840 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.73□□□□□ -0.53
HPS1-208ENST00000467246 PSAT1Q9Y617 370 aa11.73□□□□□ -0.53
HPS1-208ENST00000467246 NQO1P15559 274 aaKnown RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 ALDH3A1P30838 453 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 CCNFP41002 786 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 FYB2Q5VWT5 728 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 DCLRE1AQ6PJP8 1040 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 PCSK9Q8NBP7 692 aaKnown RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 STKLD1Q8NE28 680 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 MTBPQ96DY7 904 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 EPAS1Q99814 870 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 TRPV6Q9H1D0 765 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 NUDT5Q9UKK9 219 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 DSEQ9UL01 958 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
HPS1-208ENST00000467246 TDRD15B5MCY1 1934 aaKnown RBP11.72□□□□□ -0.53
HPS1-208ENST00000467246 CLGNO14967 610 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms