RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 SLCO1B1Q9Y6L6 691 aa19.86■□□□□ 0.77
COL9A3-206ENST00000466532 CHD6Q8TD26 2715 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 A0A1B0GVT2 93 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 E5RJQ4 531 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 THAP12O43422 761 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 APOEP02649 317 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 ASLP04424 464 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 GNA15P30679 374 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 CSKP41240 450 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 CSNK1EP49674 416 aaKnown RBP19.85■□□□□ 0.77
COL9A3-206ENST00000466532 MEA1Q16626 185 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 HLA-BQ31612 363 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 BEND5Q7L4P6 421 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 STK32AQ8WU08 396 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 MYO19Q96H55 970 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 CYTH4Q9UIA0 394 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 KNL1Q8NG31 2342 aa19.85■□□□□ 0.77
COL9A3-206ENST00000466532 PAPSS1O43252 624 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 LUC7L3O95232 432 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 ZNF883P0CG24 379 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 AFF3P51826 1226 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 DCAF6Q58WW2 860 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 FSCBQ5H9T9 825 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 MMS22LQ6ZRQ5 1243 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 ENOSF1Q7L5Y1 443 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 RAB44Q7Z6P3 723 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 CREBRFQ8IUR6 639 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 SETD7Q8WTS6 366 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 ZCCHC14Q8WYQ9 949 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 BIRC7Q96CA5 298 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 CRACR2AQ9BSW2 395 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 RSPH9Q9H1X1 276 aaPredicted RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 POPDC2Q9HBU9 364 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 SGK2Q9HBY8 427 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 ACP6Q9NPH0 428 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 TM7SF3Q9NS93 570 aa19.84■□□□□ 0.77
COL9A3-206ENST00000466532 XPO7Q9UIA9 1087 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 FNDC3AQ9Y2H6 1198 aaKnown RBP19.84■□□□□ 0.77
COL9A3-206ENST00000466532 CABIN1Q9Y6J0 2220 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 SIN3BO75182 1162 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 FSBPO95073 299 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 FTH1P19P0C7X4 201 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 USP8P40818 1118 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 YWHAZP63104 245 aaKnown RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 TEAD4Q15561 434 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 HNRNPA1L2Q32P51 320 aaKnown RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 ZC3H12AQ5D1E8 599 aaKnown RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 PITRM1Q5JRX3 1037 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 RAP1GAP2Q684P5 730 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 GJB7Q6PEY0 223 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 TRIM65Q6PJ69 517 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 TMEM110Q86TL2 294 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 CHSY1Q86X52 802 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 DHX40Q8IX18 779 aaKnown RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 LGI2Q8N0V4 545 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 PNPLA1Q8N8W4 532 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 GANCQ8TET4 914 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 MRGPRX3Q96LB0 322 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 MED15Q96RN5 788 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 PABPC3Q9H361 631 aaKnown RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 TM9SF3Q9HD45 589 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 KIAA1522Q9P206 1035 aaPredicted RBP19.83■□□□□ 0.77
COL9A3-206ENST00000466532 TJP2Q9UDY2 1190 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 PCOLCE2Q9UKZ9 415 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 SCML1Q9UN30 329 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 ERVW-1Q9UQF0 538 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 NCKAP1Q9Y2A7 1128 aa19.83■□□□□ 0.77
COL9A3-206ENST00000466532 FAM221BA6H8Z2 402 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 RNASEH1O60930 286 aaKnown RBP19.82■□□□□ 0.76
COL9A3-206ENST00000466532 CBFA2T3O75081 653 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 MOCS3O95396 460 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 TRUB2O95900 331 aaKnown RBP19.82■□□□□ 0.76
COL9A3-206ENST00000466532 SRPRAP08240 638 aaKnown RBP19.82■□□□□ 0.76
COL9A3-206ENST00000466532 SLC9A1P19634 815 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 TACR2P21452 398 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 PDCLQ13371 301 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 ARHGAP44Q17R89 818 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 USP30Q70CQ3 517 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 BTN2A3PQ96KV6 586 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 FAM81BQ96LP2 452 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 THAP9Q9H5L6 903 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 OSGEPQ9NPF4 335 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 RWDD2AQ9UIY3 292 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 CEP83Q9Y592 693 aa19.82■□□□□ 0.76
COL9A3-206ENST00000466532 ZZEF1O43149 2961 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 DOCK9Q9BZ29 2069 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 BECN2A8MW95 431 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 TTC34A8MYJ7 566 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 IGLV3-25P01717 112 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 CD27P26842 260 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 CTSOP43234 321 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-206ENST00000466532 PITX1P78337 314 aaPredicted RBP19.81■□□□□ 0.76
COL9A3-206ENST00000466532 KIF19Q2TAC6 998 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 GBP6Q6ZN66 633 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 ATP6V0D2Q8N8Y2 350 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 KDM1BQ8NB78 822 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 ADAMTS14Q8WXS8 1223 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 FBXL12Q9NXK8 326 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 KIAA1468Q9P260 1216 aa19.81■□□□□ 0.76
COL9A3-206ENST00000466532 APOBEC2Q9Y235 224 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms