RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 MSANTD2Q6P1R3 559 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 NPNTQ6UXI9 565 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC149Q6ZUS6 474 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 GAREM2Q75VX8 874 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 RFX6Q8HWS3 928 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 PQLC3Q8N755 202 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 BBOF1Q8ND07 529 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 ATXN2LQ8WWM7 1075 aaKnown RBP19.2■□□□□ 0.66
CAPN3-209ENST00000466222 SNF8Q96H20 258 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 SLC22A12Q96S37 553 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 NCAPGQ9BPX3 1015 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 SELENOSQ9BQE4 189 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 LRRC3Q9BY71 257 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 SIK2Q9H0K1 926 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 KDM4CQ9H3R0 1056 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 ETNK2Q9NVF9 386 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 TRPM5Q9NZQ8 1165 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 MYO7AQ13402 2215 aa19.2■□□□□ 0.66
CAPN3-209ENST00000466222 SLC12A8A0AV02 714 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 TLDC2A0PJX2 215 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 COPS2P61201 443 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CYP4F8P98187 520 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ITIH4Q14624 930 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ANKRD20A8PQ5CZ79 823 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 PPM1LQ5SGD2 360 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 TXNDC8Q6A555 127 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CEP128Q6ZU80 1094 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 TMC8Q8IU68 726 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC33Q8N5R6 958 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ANKS4BQ8N8V4 417 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 LRRN4Q8WUT4 740 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 TIFAQ96CG3 184 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 SERPINB11Q96P15 392 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 SERPINB12Q96P63 405 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ZNF317Q96PQ6 595 aaPredicted RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CSPG4P5Q96PW8 444 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 RNF157Q96PX1 679 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CORO1BQ9BR76 489 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 NSRP1Q9H0G5 558 aaKnown RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 C10orf88Q9H8K7 445 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 LRRC4CQ9HCJ2 640 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 GKN1Q9NS71 199 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 COL4A4P53420 1690 aaPredicted RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 PECAM1P16284 738 aaPredicted RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 GABRR2P28476 465 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CCR1P32246 355 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CCR2P41597 374 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 NRIP1P48552 1158 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 KCNQ1P51787 676 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 AUHQ13825 339 aaKnown RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 PDK2Q15119 407 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 EFHC2Q5JST6 749 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 STXBP5Q5T5C0 1151 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 SNX30Q5VWJ9 437 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 RHBDF2Q6PJF5 856 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC13Q8IYE1 715 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 CCDC197Q8NCU1 140 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 NTAN1Q96AB6 310 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 SLC39A13Q96H72 371 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 FCRL2Q96LA5 508 aaPredicted RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ADAM7Q9H2U9 754 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 INTS9Q9NV88 658 aaKnown RBP19.19■□□□□ 0.66
CAPN3-209ENST00000466222 ARHGEF38Q9NXL2 777 aa19.19■□□□□ 0.66
CAPN3-209ENST00000466222 PAGE1O75459 146 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 TJP3O95049 919 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 AMPD1P23109 780 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 PTPN7P35236 360 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 CETN2P41208 172 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 TBX4P57082 545 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 HECTD3Q5T447 861 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 FBXW10Q5XX13 1052 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 ITIH5Q86UX2 942 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 MAP7D3Q8IWC1 876 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 PDZD8Q8NEN9 1154 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 TRPC7Q9HCX4 862 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 OR12D3Q9UGF7 316 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 TLR6Q9Y2C9 796 aa19.18■□□□□ 0.66
CAPN3-209ENST00000466222 A0A1W2PRU2 124 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 KCNU1A8MYU2 1149 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ATP5C1P36542 298 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 NTHL1P78549 312 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SCAPQ12770 1279 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SWT1Q5T5J6 900 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 C1orf228Q6PIY5 440 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 C12orf76Q8N812 135 aaPredicted RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 VN1R2Q8NFZ6 395 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ATL2Q8NHH9 583 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 MDM1Q8TC05 714 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 OVCA2Q8WZ82 227 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 WBP2Q969T9 261 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 MAK16Q9BXY0 300 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 DCLK3Q9C098 648 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 NACA2Q9H009 215 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 PRO3102Q9H379 93 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 TLE6Q9H808 572 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SMPD4Q9NXE4 827 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 ASIC3Q9UHC3 531 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SCAMP3O14828 347 aaKnown RBP19.17■□□□□ 0.66
CAPN3-209ENST00000466222 TCEA3O75764 348 aa19.17■□□□□ 0.66
CAPN3-209ENST00000466222 SRGAP2BP0DMP2 458 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms