RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ARHGAP8P85298 464 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 GRB14Q14449 540 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 OTUD1Q5VV17 481 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 PDZD4Q76G19 769 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 SCUBE1Q8IWY4 988 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 TOP6BLQ8N6T0 577 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 WNT8BQ93098 351 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 NT5C3BQ969T7 300 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 CERS2Q96G23 380 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 IL1RAPL1Q9NZN1 696 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 IGSF9Q9P2J2 1179 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 STX18Q9P2W9 335 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 CCL15-CCL14A0A0B4J2E2 113 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 MBLAC1A4D2B0 266 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 KCNK1O00180 336 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 SMNDC1O75940 238 aaKnown RBP eCLIP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 BEST1O76090 585 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 GSRP00390 522 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 F2P00734 622 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 SERPINE1P05121 402 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 ERVK-10P10266 1014 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 FGF3P11487 239 aaPredicted RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 GCKP35557 465 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 GP5P40197 560 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 MLH1P40692 756 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 UBAP2LQ14157 1087 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 PAFAH1B3Q15102 231 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 CCL15Q16663 113 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 SYPL2Q5VXT5 272 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 CES3Q6UWW8 571 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 LIMS2Q7Z4I7 341 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 OSTM1Q86WC4 334 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 PPFIBP2Q8ND30 876 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 FBXO27Q8NI29 283 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 STN1Q9H668 368 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 PIGVQ9NUD9 493 aa18.8■□□□□ 0.6
SYNE4-204ENST00000465425 APOBEC2Q9Y235 224 aaKnown RBP18.8■□□□□ 0.6
SYNE4-204ENST00000465425 ITM2AO43736 263 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 TBX10O75333 385 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 PTPN1P18031 435 aaKnown RBP18.79■□□□□ 0.6
SYNE4-204ENST00000465425 PCLAFQ15004 111 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 INSCQ1MX18 579 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 SPANXN3Q5MJ09 141 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 LRRC74BQ6ZQY2 392 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 SLC7A14Q8TBB6 771 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 AGAP3Q96P47 875 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 CPNE1Q99829 537 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 THTPAQ9BU02 230 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 ZNF408Q9H9D4 720 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 SLC45A1Q9Y2W3 748 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 EIF4E1BA6NMX2 242 aaKnown RBP18.79■□□□□ 0.6
SYNE4-204ENST00000465425 TM7SF2O76062 418 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 GRK2P25098 689 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 TKTL1P51854 596 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 MAP3K7CLP57077 242 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 DPYSQ14117 519 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 XKR4Q5GH76 650 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 TEDDM1Q5T9Z0 273 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 CAPRIN2Q6IMN6 1127 aaKnown RBP18.79■□□□□ 0.6
SYNE4-204ENST00000465425 CLEC20AQ6ZU45 233 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 C10orf107Q8IVU9 208 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 DNAAF3Q8N9W5 541 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 KCTD13Q8WZ19 329 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 ZNF333Q96JL9 665 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 FAM96AQ9H5X1 160 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 IPPQ9Y573 584 aa18.79■□□□□ 0.6
SYNE4-204ENST00000465425 F8W8V4 182 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 ZNF189O75820 626 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-204ENST00000465425 PDHA1P08559 390 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 MX2P20592 715 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 TRMT5Q32P41 509 aaKnown RBP18.78■□□□□ 0.6
SYNE4-204ENST00000465425 PPM1JQ5JR12 505 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 GRTP1Q5TC63 336 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 NET1Q7Z628 596 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-204ENST00000465425 OR52K1Q8NGK4 314 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 SCG3Q8WXD2 468 aaKnown RBP18.78■□□□□ 0.6
SYNE4-204ENST00000465425 SPDL1Q96EA4 605 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 LRRC40Q9H9A6 602 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 COPG2Q9UBF2 871 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 DCLK1O15075 740 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 FAM200BP0CF97 657 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 AOC1P19801 751 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 GTF2A2P52657 109 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 MFSD10Q14728 455 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 C9orf131Q5VYM1 1079 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 WSCD1Q658N2 575 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 BNIPLQ7Z465 357 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 ULK2Q8IYT8 1036 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 SLC2A13Q96QE2 648 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 C1orf21Q9H246 121 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 KRT82Q9NSB4 513 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 BFARQ9NZS9 450 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 ZNF212Q9UDV6 495 aa18.78■□□□□ 0.6
SYNE4-204ENST00000465425 CORO1CQ9ULV4 474 aaPredicted RBP18.78■□□□□ 0.6
SYNE4-204ENST00000465425 PROCP04070 461 aa18.77■□□□□ 0.6
SYNE4-204ENST00000465425 SKIP12755 728 aa18.77■□□□□ 0.6
SYNE4-204ENST00000465425 ERCC2P18074 760 aa18.77■□□□□ 0.6
SYNE4-204ENST00000465425 PAX7P23759 505 aa18.77■□□□□ 0.6
SYNE4-204ENST00000465425 ADRA1BP35368 520 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms