RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 BNIPLQ7Z465 357 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 TMEFF1Q8IYR6 380 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 MYO19Q96H55 970 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 C11orf70Q9BRQ4 267 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 RXFP3Q9NSD7 469 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SLC12A6Q9UHW9 1150 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 PLA2G4CQ9UP65 541 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 SNX10Q9Y5X0 201 aa13.41□□□□□ -0.26
XRN1-203ENST00000463916 F5H5T6 163 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 GDF9O60383 454 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 RHOBTB1O94844 696 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 EPHX1P07099 455 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 DLDP09622 509 aaKnown RBP13.4□□□□□ -0.26
XRN1-203ENST00000463916 CSKP41240 450 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 PTGER3P43115 390 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 CTSOP43234 321 aaPredicted RBP13.4□□□□□ -0.26
XRN1-203ENST00000463916 COPAP53621 1224 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 CREB5Q02930 508 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 CDH18Q13634 790 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 CLEC16AQ2KHT3 1053 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 ARTNQ5T4W7 220 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 PRR23CQ6ZRP0 262 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 APCDD1Q8J025 514 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 DEFB119Q8N690 84 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 GPR161Q8N6U8 529 aaKnown RBP13.4□□□□□ -0.26
XRN1-203ENST00000463916 TTC17Q96AE7 1141 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 PGAP3Q96FM1 320 aaPredicted RBP13.4□□□□□ -0.26
XRN1-203ENST00000463916 AGPAT1Q99943 283 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 SIK2Q9H0K1 926 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 MTG2Q9H4K7 406 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 WDCPQ9H6R7 721 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 METTL5Q9NRN9 209 aaKnown RBP13.4□□□□□ -0.26
XRN1-203ENST00000463916 ARHGEF38Q9NXL2 777 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 VANGL2Q9ULK5 521 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 GON4LQ3T8J9 2241 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 CKAP5Q14008 2032 aa13.4□□□□□ -0.26
XRN1-203ENST00000463916 IGHV1OR15-9A0A0B4J2B8 117 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 BCLAF3A2AJT9 711 aaKnown RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 TYW5A2RUC4 315 aaKnown RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 H0Y626 953 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 POLR2EP19388 210 aaKnown RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 MPLP40238 635 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 DEUP1Q05D60 604 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 STARD3Q14849 445 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 FNDC3BQ53EP0 1204 aaKnown RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 SH3PXD2AQ5TCZ1 1133 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 E4F1Q66K89 784 aaPredicted RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 TCEAL6Q6IPX3 200 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 TRIM72Q6ZMU5 477 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 CCAR2Q8N163 923 aaKnown RBP13.4□□□□□ -0.27
XRN1-203ENST00000463916 MSANTD4Q8NCY6 345 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 OR52K2Q8NGK3 314 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 JOSD2Q8TAC2 188 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 TCEAL3Q969E4 200 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 SYT11Q9BT88 431 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 RRN3Q9NYV6 651 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 STAP1Q9ULZ2 295 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 CYP8B1Q9UNU6 501 aa13.4□□□□□ -0.27
XRN1-203ENST00000463916 PLXND1Q9Y4D7 1925 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 MAP3K13O43283 966 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 SYNCRIPO60506 623 aaKnown RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 SERPINC1P01008 464 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 ATP5BP06576 529 aaKnown RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 ZNF806P0C7X5 589 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 ID4P47928 161 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 RSPO4Q2I0M5 234 aaPredicted RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 FILIP1LQ4L180 1135 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 CXorf57Q6NSI4 855 aaKnown RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 KIAA1324Q6UXG2 1013 aaKnown RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 ARMCX6Q7L4S7 300 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 ARCQ7LC44 396 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 ZNF683Q8IZ20 524 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 SPACA7Q96KW9 195 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 MRGPRX3Q96LB0 322 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 RPRD1AQ96P16 312 aaPredicted RBP13.39□□□□□ -0.27
XRN1-203ENST00000463916 PRDM16Q9HAZ2 1276 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 PCDHGA5Q9Y5G8 931 aa13.39□□□□□ -0.27
XRN1-203ENST00000463916 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 MZF1P28698 734 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 NSFP46459 744 aaKnown RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 DHPSP49366 369 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 ATP11AP98196 1134 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 CAMK2GQ13555 558 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 C15orf59Q2T9L4 293 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 CCDC14Q49A88 953 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 C11orf74Q86VG3 221 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 PHF13Q86YI8 300 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 RXFP2Q8WXD0 754 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 TTYH3Q9C0H2 523 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 SEPT11Q9NVA2 429 aaKnown RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 TAS2R14Q9NYV8 317 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 ADAM22Q9P0K1 906 aa13.38□□□□□ -0.27
XRN1-203ENST00000463916 KIAA1522Q9P206 1035 aaPredicted RBP13.38□□□□□ -0.27
XRN1-203ENST00000463916 NUP205Q92621 2012 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms