RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 IDH1O75874 414 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TM7SF2O76062 418 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CAMTA2O94983 1202 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 OR5F1O95221 314 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KRT8P05787 483 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CD48P09326 243 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PIM1P11309 404 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CETPP11597 493 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KRT3P12035 628 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RARGP13631 454 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF182P17025 639 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RPL17P18621 184 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ATF6P18850 670 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NOS2P35228 1153 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RPA3P35244 121 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SOX5P35711 763 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NAMPTP43490 491 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 BLVRAP53004 296 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ATXN3P54252 364 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GPR85P60893 370 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 POLR2GP62487 172 aaKnown RBP eCLIP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TAGLNQ01995 201 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TAP1Q03518 808 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SNAPC2Q13487 334 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 APOFQ13790 326 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 DLG2Q15700 870 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 UBE2SQ16763 222 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LETM2Q2VYF4 491 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CCDC14Q49A88 953 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LCE2CQ5TA81 110 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SHEQ5VZ18 495 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MFSD5Q6N075 450 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MPRIPQ6WCQ1 1025 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NLRP8Q86W28 1048 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 DCP2Q8IU60 420 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 RELL1Q8IUW5 271 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TTC5Q8N0Z6 440 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ANKRD35Q8N283 1001 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 LRRC71Q8N4P6 559 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CCNYL1Q8N7R7 359 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 FANCBQ8NB91 859 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ZSWIM2Q8NEG5 633 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 OR5H6Q8NGV6 325 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ST8SIA2Q92186 375 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 CFAP36Q96G28 342 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM87BQ96K49 555 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NLRP4Q96MN2 994 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ALPK1Q96QP1 1244 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM56Q9BRZ2 755 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM120AQ9BXJ8 343 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF696Q9H7X3 374 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SLC38A10Q9HBR0 1119 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MCCC2Q9HCC0 563 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 MOV10Q9HCE1 1003 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 AVENQ9NQS1 362 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PLK2Q9NYY3 685 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 C9orf78Q9NZ63 289 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ACTR3BQ9P1U1 418 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ANKFY1Q9P2R3 1169 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 PPARGC1AQ9UBK2 798 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 UBA2Q9UBT2 640 aaPredicted RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 STK17AQ9UEE5 414 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 NAALADL1Q9UQQ1 740 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 GNEQ9Y223 722 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 APOBEC2Q9Y235 224 aaKnown RBP3.7□□□□□ -1.82
COL8A1-205ENST00000463753 SNX8Q9Y5X2 465 aa3.7□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGEF35A5YM69 484 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANKRD63C9JTQ0 380 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 E9PMD0 336 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 RGS13O14921 159 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KIAA0391O15091 583 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MSI1O43347 362 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MAGEC1O60732 1142 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 KCNH1O95259 989 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 F11P03951 625 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 MCF2P10911 925 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF23P17027 643 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 EIF2AK2P19525 551 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ITGAXP20702 1163 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ARNTP27540 789 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SERPINB1P30740 379 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 L1CAMP32004 1257 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NR2C2P49116 596 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ACOT2P49753 483 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SLC25A3Q00325 362 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 GALK2Q01415 458 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IL1RL1Q01638 556 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 POU4F2Q12837 409 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NFIAQ12857 509 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 LAPTM5Q13571 262 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 COG2Q14746 738 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF174Q15697 407 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 NRF1Q16656 503 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 ANO4Q32M45 955 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 AARS2Q5JTZ9 985 aaKnown RBP3.69□□□□□ -1.82
COL8A1-205ENST00000463753 SULT1C3Q6IMI6 304 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 AADACL2Q6P093 401 aa3.69□□□□□ -1.82
COL8A1-205ENST00000463753 IDO2Q6ZQW0 420 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms