RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 WDTC1Q8N5D0 677 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 ZNF419Q96HQ0 510 aaPredicted RBP13.9□□□□□ -0.19
COMMD3-205ENST00000463688 CCDC114Q96M63 670 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 ERGIC2Q96RQ1 377 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 TMEM245Q9H330 911 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 SGK2Q9HBY8 427 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 TMEM9BQ9NQ34 198 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 FAM207AQ9NSI2 230 aaPredicted RBP13.9□□□□□ -0.19
COMMD3-205ENST00000463688 SLC6A14Q9UN76 642 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 FHOD1Q9Y613 1164 aa13.9□□□□□ -0.19
COMMD3-205ENST00000463688 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.9□□□□□ -0.19
COMMD3-205ENST00000463688 IGHV1OR15-9A0A0B4J2B8 117 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 M0QYT0 321 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 CALB1P05937 261 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ETFBP38117 255 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 KRT83P78385 493 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ECT2LQ008S8 904 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 DEUP1Q05D60 604 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 NME3Q13232 169 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ZNF776Q68DI1 518 aaPredicted RBP13.89□□□□□ -0.19
COMMD3-205ENST00000463688 FAM183BPQ6ZVS7 135 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 USP30Q70CQ3 517 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ADIPOR2Q86V24 386 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 RGL4Q8IZJ4 473 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 HDDC3Q8N4P3 179 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ADAM32Q8TC27 787 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 EPS8L1Q8TE68 723 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 RLN3Q8WXF3 142 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 IQCDQ96DY2 449 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 RPRD1AQ96P16 312 aaPredicted RBP13.89□□□□□ -0.19
COMMD3-205ENST00000463688 HAPLN3Q96S86 360 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 ACOX2Q99424 681 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 EDEM2Q9BV94 578 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 SLC32A1Q9H598 525 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 POLR3BQ9NW08 1133 aaPredicted RBP13.89□□□□□ -0.19
COMMD3-205ENST00000463688 USP36Q9P275 1121 aaKnown RBP13.89□□□□□ -0.19
COMMD3-205ENST00000463688 CYTH4Q9UIA0 394 aa13.89□□□□□ -0.19
COMMD3-205ENST00000463688 MYO16Q9Y6X6 1858 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 EDDM13A0A1B0GTR0 161 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 SERPINF2P08697 491 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 FERP16591 822 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 PLK1P53350 603 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 CDH4P55283 916 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 EIF4EBP2Q13542 120 aaPredicted RBP13.88□□□□□ -0.19
COMMD3-205ENST00000463688 HNRNPA1L2Q32P51 320 aaKnown RBP13.88□□□□□ -0.19
COMMD3-205ENST00000463688 TRIM61Q5EBN2 209 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 C6orf118Q5T5N4 469 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 FAM46CQ5VWP2 391 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 PEAR1Q5VY43 1037 aaPredicted RBP13.88□□□□□ -0.19
COMMD3-205ENST00000463688 ZNF783Q6ZMS7 281 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 TMEFF1Q8IYR6 380 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 C2orf49Q9BVC5 232 aaPredicted RBP13.88□□□□□ -0.19
COMMD3-205ENST00000463688 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
COMMD3-205ENST00000463688 CD248Q9HCU0 757 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 ACP6Q9NPH0 428 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 PILRBQ9UKJ0 227 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 CYP8B1Q9UNU6 501 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 INVSQ9Y283 1065 aa13.88□□□□□ -0.19
COMMD3-205ENST00000463688 FRYLO94915 3013 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 CXorf51AA0A1B0GTR3 108 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 MEI4A8MW99 385 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 ERBB2P04626 1255 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 TPM3P06753 285 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SLC6A4P31645 630 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 NUDT1P36639 197 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 CSKP41240 450 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 CXCR3P49682 368 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 RNASE9P60153 205 aaKnown RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SLC14A1Q13336 389 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SF3A2Q15428 464 aaKnown RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 TEAD4Q15561 434 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SKOR2Q2VWA4 1001 aaPredicted RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 KIAA1211LQ6NV74 962 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SETD3Q86TU7 594 aaPredicted RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 NT5C3BQ969T7 300 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 NPY6RQ99463 290 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 NCAPGQ9BPX3 1015 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 EDEM3Q9BZQ6 932 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 BTBD1Q9H0C5 482 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 WSB2Q9NYS7 404 aaPredicted RBP13.87□□□□□ -0.19
COMMD3-205ENST00000463688 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
COMMD3-205ENST00000463688 SYNJ2BP-COX16A0A087WUM0 186 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 A0A1B0GTW7 788 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 GFPT2O94808 682 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 ADH1BP00325 375 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 CALCAP01258 141 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 CFIP05156 583 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 ZNF18P17022 549 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 BCKDHBP21953 392 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 MMP8P22894 467 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 SDC4P31431 198 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 SULT1E1P49888 294 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 ZNF165P49910 485 aa13.86□□□□□ -0.19
COMMD3-205ENST00000463688 TPMTP51580 245 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms