RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 PIK3R6Q5UE93 754 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 BSPRYQ5W0U4 402 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 ARHGAP17Q68EM7 881 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 RFWD3Q6PCD5 774 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 SND1Q7KZF4 910 aaKnown RBP eCLIP15.04■□□□□ -0
SMC1A-204ENST00000463684 MFN1Q8IWA4 741 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 CCDC117Q8IWD4 279 aaPredicted RBP15.04■□□□□ -0
SMC1A-204ENST00000463684 UNC45BQ8IWX7 931 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 GRAMD1CQ8IYS0 662 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 SLC4A11Q8NBS3 891 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 KIAA0895Q8NCT3 520 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 ZNF248Q8NDW4 579 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 OR14C36Q8NHC7 312 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 WFDC5Q8TCV5 224 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 FAXDC2Q96IV6 333 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 CISHQ9NSE2 258 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 STIM2Q9P246 746 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 HESX1Q9UBX0 185 aa15.04■□□□□ -0
SMC1A-204ENST00000463684 KNL1Q8NG31 2342 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3DA0A087WVF3 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3IA0A087WXS9 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3EA0A087X179 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3KA0A087X1G2 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TARSL2A2RTX5 802 aaKnown RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 TYW5A2RUC4 315 aaKnown RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3FA6NER0 549 aaPredicted RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3LB9A6J9 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 WNT9AO14904 365 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 XPO1O14980 1071 aaKnown RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 KLRC4O43908 158 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 MAGEC1O60732 1142 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3HP0C7X1 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TRIM49P0CI25 452 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TRIM49CP0CI26 452 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 GOT1P17174 413 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 CSKP41240 450 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 RAD23BP54727 409 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 RHDQ02161 417 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 PPP3CAQ08209 521 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 NUMA1Q14980 2115 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 C9orf64Q5T6V5 341 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 SFMBT2Q5VUG0 894 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3GQ6DHY5 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3CQ6IPX1 549 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 PCSK4Q6UW60 755 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 KDM7AQ6ZMT4 941 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 ERICH1Q86X53 443 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TBC1D3Q8IZP1 549 aaPredicted RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 SIX6OS1Q8N1H7 587 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 DCBLD1Q8N8Z6 715 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 KDM1BQ8NB78 822 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 FIBINQ8TAL6 211 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 RFFLQ8WZ73 363 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 WBP1Q96G27 269 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 MYO19Q96H55 970 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 TMEM8AQ9HCN3 771 aa15.03■□□□□ -0
SMC1A-204ENST00000463684 MUC22E2RYF6 1773 aaPredicted RBP15.03■□□□□ -0
SMC1A-204ENST00000463684 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 YJEFN3A6XGL0 299 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 E7ENQ6 273 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 MSI1O43347 362 aaKnown RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 ACP1P24666 158 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 UCNP55089 124 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 TMPRSS3P57727 454 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 INSM1Q01101 510 aaPredicted RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 ADIGQ0VDE8 80 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 ARID5BQ14865 1188 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 GOLGA7BQ2TAP0 167 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 HS1BP3Q53T59 392 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 NUGGCQ68CJ6 796 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 KRT39Q6A163 491 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 BHLHA9Q7RTU4 235 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 PRPF39Q86UA1 669 aaKnown RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 MFSD2AQ8NA29 543 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 NAF1Q96HR8 494 aaKnown RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 INTS4Q96HW7 963 aaKnown RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 DDX50Q9BQ39 737 aaKnown RBP15.02■□□□□ -0
SMC1A-204ENST00000463684 ERVW-1Q9UQF0 538 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 TRAF3IP3Q9Y228 551 aa15.02■□□□□ -0
SMC1A-204ENST00000463684 EDDM13A0A1B0GTR0 161 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 TULP2O00295 520 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 ACSL4O60488 711 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 MOCS3O95396 460 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 ADH1BP00325 375 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 MT-CO3P00414 261 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 SRPRAP08240 638 aaKnown RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 C5AR1P21730 350 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 NR2F2P24468 414 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 GTF2H1P32780 548 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 PSMC2P35998 433 aaKnown RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 ME1P48163 572 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 PSMD8P48556 350 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 PCBP4P57723 403 aaKnown RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 ENPEPQ07075 957 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 BST2Q10589 180 aaKnown RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 SGO2Q562F6 1265 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 RNF219Q5W0B1 726 aaPredicted RBP15.01□□□□□ -0.01
SMC1A-204ENST00000463684 NAPEPLDQ6IQ20 393 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 FAM186BQ8IYM0 893 aa15.01□□□□□ -0.01
SMC1A-204ENST00000463684 LSMEM2Q8N112 164 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms