RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FBXL12Q9NXK8 326 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 STIM2Q9P246 746 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 HPSEQ9Y251 543 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 ATP6V1DQ9Y5K8 247 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 EIF4E1BA6NMX2 242 aaKnown RBP16.29■□□□□ 0.2
SND1-203ENST00000463020 RHOBTB3O94955 611 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 KRT13P13646 458 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 LCP1P13796 627 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 CSKP41240 450 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 RGS7P49802 495 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 MXI1P50539 228 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 C21orf59P57076 290 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 DAOAP59103 153 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 PPP2CBP62714 309 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
SND1-203ENST00000463020 PPP2CAP67775 309 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 TTC31Q49AM3 519 aaPredicted RBP16.29■□□□□ 0.2
SND1-203ENST00000463020 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 HES3Q5TGS1 186 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 KANSL1Q7Z3B3 1105 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 MMAAQ8IVH4 418 aaKnown RBP16.29■□□□□ 0.2
SND1-203ENST00000463020 GANCQ8TET4 914 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 TFAP2BQ92481 460 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 SLC39A7Q92504 469 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 TSC1Q92574 1164 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 TTC17Q96AE7 1141 aa16.29■□□□□ 0.2
SND1-203ENST00000463020 UBL7Q96S82 380 aaPredicted RBP16.29■□□□□ 0.2
SND1-203ENST00000463020 CYSRT1A8MQ03 144 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 O00370 1275 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 RFPL3O75679 317 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 LDOC1O95751 146 aaPredicted RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 VAV1P15498 845 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 POLR2EP19388 210 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 EPHA8P29322 1005 aaPredicted RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 PSMC2P35998 433 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 BST2Q10589 180 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 DPYDQ12882 1025 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 ADAM9Q13443 819 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 CST6Q15828 149 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 HNRNPA1L2Q32P51 320 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 FBXL19Q6PCT2 694 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 USP30Q70CQ3 517 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 SPATS2Q86XZ4 545 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 FBXL13Q8NEE6 735 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 RNF139Q8WU17 664 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 NXPE2Q96DL1 559 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 FAM129BQ96TA1 746 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 FBRSQ9HAH7 460 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 LRRC4Q9HBW1 653 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 OLA1Q9NTK5 396 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 XPO7Q9UIA9 1087 aaKnown RBP16.28■□□□□ 0.2
SND1-203ENST00000463020 SLCO3A1Q9UIG8 710 aa16.28■□□□□ 0.2
SND1-203ENST00000463020 SHROOM3Q8TF72 1996 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 KNTC1P50748 2209 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 NYNRINQ9P2P1 1898 aaKnown RBP16.27■□□□□ 0.2
SND1-203ENST00000463020 ATXN7O15265 892 aaPredicted RBP16.27■□□□□ 0.2
SND1-203ENST00000463020 RNASEH2AO75792 299 aaKnown RBP16.27■□□□□ 0.2
SND1-203ENST00000463020 LATS1O95835 1130 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 FYNP06241 537 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 JUPP14923 745 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 GTF2H1P32780 548 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 PSMD8P48556 350 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 NDUFA8P51970 172 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 PMF1Q6P1K2 205 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 MSANTD2Q6P1R3 559 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 MFN1Q8IWA4 741 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 CFAP52Q8N1V2 620 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 COL26A1Q96A83 441 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 FCRL2Q96LA5 508 aaPredicted RBP16.27■□□□□ 0.2
SND1-203ENST00000463020 NUCKS1Q9H1E3 243 aaKnown RBP16.27■□□□□ 0.2
SND1-203ENST00000463020 AASDHPPTQ9NRN7 309 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 PCDHGA1Q9Y5H4 931 aa16.27■□□□□ 0.2
SND1-203ENST00000463020 MYLKQ15746 1914 aa16.27■□□□□ 0.19
SND1-203ENST00000463020 ACSL4O60488 711 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 ATP5BP06576 529 aaKnown RBP16.26■□□□□ 0.19
SND1-203ENST00000463020 ITGAVP06756 1048 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 CD19P15391 556 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 ABCB4P21439 1286 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 CD38P28907 300 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 STK19P49842 368 aaPredicted RBP16.26■□□□□ 0.19
SND1-203ENST00000463020 ADPRHP54922 357 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 NXPH1P58417 271 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 ENPEPQ07075 957 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 LRMPQ12912 555 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 CUL2Q13617 745 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 E2F5Q15329 346 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 PITRM1Q5JRX3 1037 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 SFMBT2Q5VUG0 894 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 APCDD1Q8J025 514 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 SIX6OS1Q8N1H7 587 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 STK40Q8N2I9 435 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 GUF1Q8N442 669 aaKnown RBP16.26■□□□□ 0.19
SND1-203ENST00000463020 CARNMT1Q8N4J0 409 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 CCDC150Q8NCX0 1101 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 FIBINQ8TAL6 211 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 KCTD13Q8WZ19 329 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 GOLGA1Q92805 767 aa16.26■□□□□ 0.19
SND1-203ENST00000463020 FCRL3Q96P31 734 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms