RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 PMPCBO75439 489 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 BANF1O75531 89 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 ICAM1P05362 532 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 SNRPB2P08579 225 aaKnown RBP16.14■□□□□ 0.18
SMC4-204ENST00000462787 CYP3A7P24462 503 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 DDR2Q16832 855 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 RFWD3Q6PCD5 774 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 MAGEE2Q8TD90 523 aaPredicted RBP16.14■□□□□ 0.18
SMC4-204ENST00000462787 C10orf82Q8WW14 230 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 SLC44A1Q8WWI5 657 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 PABPC5Q96DU9 382 aaKnown RBP16.14■□□□□ 0.18
SMC4-204ENST00000462787 CLPTM1LQ96KA5 538 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 TMEM59LQ9UK28 342 aa16.14■□□□□ 0.18
SMC4-204ENST00000462787 CYP2C9P11712 490 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 TNK2Q07912 1038 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 CDH17Q12864 832 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 FAM45BPQ6NSW5 357 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 ZDHHC24Q6UX98 284 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 SZRD1Q7Z422 152 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 C19orf18Q8NEA5 215 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 RCN3Q96D15 328 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 BTBD3Q9Y2F9 522 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 WASF2Q9Y6W5 498 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 CYP3A4P08684 503 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 HIRAP54198 1017 aaPredicted RBP16.14■□□□□ 0.17
SMC4-204ENST00000462787 BNIP2Q12982 314 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 Q3C1V9 767 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 GALNTL6Q49A17 601 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 ATG16L2Q8NAA4 619 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
SMC4-204ENST00000462787 PDPRQ8NCN5 879 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 EBF3Q9H4W6 596 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 AFF4Q9UHB7 1163 aaKnown RBP16.14■□□□□ 0.17
SMC4-204ENST00000462787 PACSIN3Q9UKS6 424 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 AGLP35573 1532 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 EML1O00423 815 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 VWA5AO00534 786 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 AREL1O15033 823 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 SEC24AO95486 1093 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 JAM2P57087 298 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 NFIL3Q16649 462 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 SEZ6Q53EL9 994 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 ABI1Q8IZP0 508 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 EFCAB3Q8N7B9 438 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 SEPT8Q92599 483 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 TAAR1Q96RJ0 339 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 TUBGCP5Q96RT8 1024 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 TEX13BQ9BXU2 312 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 PRDM16Q9HAZ2 1276 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 SYTL2Q9HCH5 934 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 TAS2R1Q9NYW7 299 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 PRKAG3Q9UGI9 489 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 MTF2Q9Y483 593 aaPredicted RBP16.14■□□□□ 0.17
SMC4-204ENST00000462787 DIP2CQ9Y2E4 1556 aa16.14■□□□□ 0.17
SMC4-204ENST00000462787 PDE9AO76083 593 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 ARPP19P56211 112 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 RPL26P61254 145 aaKnown RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 EGFLAMQ63HQ2 1017 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 BNIPLQ7Z465 357 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 SMARCAD1Q9H4L7 1026 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 WDR37Q9Y2I8 494 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 STXBP5LQ9Y2K9 1186 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 TRAFD1O14545 582 aaPredicted RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 HS6ST1O60243 411 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 LGR5O75473 907 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 VAPBO95292 243 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 PRDX6P30041 224 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 CDC42EP1Q00587 391 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 ARMCX6Q7L4S7 300 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 FAM47BQ8NA70 645 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 CACNA2D2Q9NY47 1150 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 SLC30A1Q9Y6M5 507 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 ARHGAP23Q9P227 1491 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 SIGLEC16A6NMB1 481 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 FOXN2P32314 431 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 CYP1B1Q16678 543 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 UGT3A1Q6NUS8 523 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 FAM43BQ6ZT52 329 aaPredicted RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 KBTBD2Q8IY47 623 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 SYTL1Q8IYJ3 562 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 MECRQ9BV79 373 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 AGO4Q9HCK5 861 aaKnown RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 NKX1-2Q9UD57 310 aaPredicted RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 CDV3Q9UKY7 258 aaKnown RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 FANCGO15287 622 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 MT-CO1P00395 513 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 ITFG1Q8TB96 612 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 RDH11Q8TC12 318 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 CDH19Q9H159 772 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
SMC4-204ENST00000462787 TRNAU1APQ9NX07 287 aaKnown RBP16.13■□□□□ 0.17
SMC4-204ENST00000462787 MSH3P20585 1137 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
SMC4-204ENST00000462787 MPZL3Q6UWV2 235 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 KRT73Q86Y46 540 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 HPS6Q86YV9 775 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 AMER2Q8N7J2 671 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 MCRS1Q96EZ8 462 aa16.12■□□□□ 0.17
SMC4-204ENST00000462787 EBNA1BP2Q99848 306 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms