RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 TKTL1P51854 596 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 STK38Q15208 465 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 PROX2Q3B8N5 592 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 HS1BP3Q53T59 392 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 C9orf64Q5T6V5 341 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 ARHGAP40Q5TG30 622 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 PIK3R6Q5UE93 754 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 KDM7AQ6ZMT4 941 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 KANSL1Q7Z3B3 1105 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 PRPF39Q86UA1 669 aaKnown RBP12.12□□□□□ -0.47
PCCB-203ENST00000462542 PIGZQ86VD9 579 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 UNC45BQ8IWX7 931 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 FAM181AQ8N9Y4 354 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 ANKRD52Q8NB46 1076 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 FIBINQ8TAL6 211 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 AZIN2Q96A70 460 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 NIF3L1Q9GZT8 377 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
PCCB-203ENST00000462542 TP53BP1Q12888 1972 aaPredicted RBP12.12□□□□□ -0.47
PCCB-203ENST00000462542 ARID1BQ8NFD5 2236 aaPredicted RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3DA0A087WVF3 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3IA0A087WXS9 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3EA0A087X179 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3KA0A087X1G2 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3FA6NER0 549 aaPredicted RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3LB9A6J9 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 WNT9AO14904 365 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 MAPK13O15264 365 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SPTLC2O15270 562 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 LATO43561 262 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBL1XO60907 577 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 PPP6R2O75170 966 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 ADH1BP00325 375 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SRPRAP08240 638 aaKnown RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3HP0C7X1 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SYT1P21579 422 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 C5AR1P21730 350 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 CD70P32970 193 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 LSSP48449 732 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SLC11A2P49281 568 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 ENPEPQ07075 957 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 VAC14Q08AM6 782 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 BSPRYQ5W0U4 402 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 ARHGAP17Q68EM7 881 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3GQ6DHY5 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3CQ6IPX1 549 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 NAPEPLDQ6IQ20 393 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 MMAAQ8IVH4 418 aaKnown RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 CCDC117Q8IWD4 279 aaPredicted RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 TBC1D3Q8IZP1 549 aaPredicted RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 LINC00301Q8NCQ3 95 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 MED8Q96G25 268 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 MYO19Q96H55 970 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 DDX50Q9BQ39 737 aaKnown RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
PCCB-203ENST00000462542 CPNE5Q9HCH3 593 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 ABCC13Q9NSE7 274 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SERGEFQ9UGK8 458 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 DMTF1Q9Y222 760 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
PCCB-203ENST00000462542 SPTA1P02549 2419 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 EDDM13A0A1B0GTR0 161 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 SIGLEC6O43699 453 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 CUTAO60888 179 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 VAMP7P51809 220 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 CUL4AQ13619 759 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 STAT4Q14765 748 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 ZNF394Q53GI3 561 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 C1orf220Q5T0J3 134 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
PCCB-203ENST00000462542 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 TTC9Q92623 222 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 LMLNQ96KR4 655 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 IPO9Q96P70 1041 aaKnown RBP12.1□□□□□ -0.47
PCCB-203ENST00000462542 DEPDC7Q96QD5 511 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 MTG2Q9H4K7 406 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 POLR1BQ9H9Y6 1135 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 LRRC4Q9HBW1 653 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 SFMBT1Q9UHJ3 866 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 SSUH2Q9Y2M2 353 aa12.1□□□□□ -0.47
PCCB-203ENST00000462542 TYW5A2RUC4 315 aaKnown RBP12.09□□□□□ -0.47
PCCB-203ENST00000462542 XPO1O14980 1071 aaKnown RBP12.09□□□□□ -0.47
PCCB-203ENST00000462542 POLR2DO15514 142 aaKnown RBP12.09□□□□□ -0.47
PCCB-203ENST00000462542 KLK10O43240 276 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 OPA1O60313 960 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 MOCS3O95396 460 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 NR3C1P04150 777 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 PDIA4P13667 645 aaKnown RBP12.09□□□□□ -0.47
PCCB-203ENST00000462542 CSKP41240 450 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 ADPRHP54922 357 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 DAB2P98082 770 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 STK4Q13043 487 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 LY6DQ14210 128 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 CDCP2Q5VXM1 449 aa12.09□□□□□ -0.47
PCCB-203ENST00000462542 CEP135Q66GS9 1140 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms