RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 NT5C1AQ9BXI3 368 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 CDH19Q9H159 772 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 SNX15Q9NRS6 342 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 PSMD13Q9UNM6 376 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 AP4E1Q9UPM8 1137 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 PCDHB12Q9Y5F1 795 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 A0A0A0MRY4 1105 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 CREB3O43889 395 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 FBXO21O94952 628 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 PGAM1P18669 254 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 SERPINB5P36952 375 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 RANBP1P43487 201 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 R3HDM1Q15032 1099 aaKnown RBP18.92■□□□□ 0.62
HPS3-204ENST00000462030 INSCQ1MX18 579 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 LRRC8BQ6P9F7 803 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 METTL7BQ6UX53 244 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 MARVELD2Q8N4S9 558 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 SPATA13Q96N96 652 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 EPB41L1Q9H4G0 881 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 ATXN10Q9UBB4 475 aa18.92■□□□□ 0.62
HPS3-204ENST00000462030 AIM2O14862 343 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 DNAJA2O60884 412 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 ARIH2O95376 493 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 HSPA4LO95757 839 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 TFAP2AP05549 437 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 MLNP12872 115 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 MX2P20592 715 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 PRDX6P30041 224 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 FSCBQ5H9T9 825 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 PPM1LQ5SGD2 360 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 RBM44Q6ZP01 1051 aaKnown RBP18.91■□□□□ 0.62
HPS3-204ENST00000462030 SAMD7Q7Z3H4 446 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 PYROXD2Q8N2H3 581 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 CCDC185Q8N715 623 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 PIP4K2CQ8TBX8 421 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 MOCOSQ96EN8 888 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 SSX2IPQ9Y2D8 614 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 ZNF638Q14966 1978 aaKnown RBP18.91■□□□□ 0.62
HPS3-204ENST00000462030 GOLGA8QA0A0J9YX86 632 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 GOLGA8OA6NCC3 632 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 SOWAHBA6NEL2 793 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 GOLGA8NF8WBI6 632 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 VILLO15195 856 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 ATP9BO43861 1147 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 GAS2O43903 313 aaKnown RBP18.91■□□□□ 0.62
HPS3-204ENST00000462030 NR2C2P49116 596 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 NUDT2P50583 147 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 OLIG2Q13516 323 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 SLC10A6Q3KNW5 377 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 DCLK2Q8N568 766 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 METTL25Q8N6Q8 603 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 CPB2Q96IY4 423 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 HIC2Q96JB3 615 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 DNAJC1Q96KC8 554 aaKnown RBP18.91■□□□□ 0.62
HPS3-204ENST00000462030 SLC4A5Q9BY07 1137 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 ACSS2Q9NR19 701 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 TXNDC16Q9P2K2 825 aa18.91■□□□□ 0.62
HPS3-204ENST00000462030 ZNF487B1APH4 448 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 DENRO43583 198 aaKnown RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 GOT1P17174 413 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 MSX2P35548 267 aaPredicted RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 GTF2A2P52657 109 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 MRPS22P82650 360 aaKnown RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 GK3PQ14409 553 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 PKDCCQ504Y2 493 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 ACOT1Q86TX2 421 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 PPP1R36Q96LQ0 422 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 LPIN3Q9BQK8 851 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 IRAK4Q9NWZ3 460 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 CDY2AQ9Y6F7 541 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 CDY1Q9Y6F8 540 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 MYOCOSA0A1B0GUC4 107 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 PDLIM1O00151 329 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 DGKIO75912 1065 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 ASLP04424 464 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 ZFXP17010 805 aaPredicted RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 ACAT1P24752 427 aaKnown RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 GP5P40197 560 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 ABCG1P45844 678 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 INHBCP55103 352 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 DGCR14Q96DF8 476 aaKnown RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 C6orf203Q9P0P8 240 aaPredicted RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 STK39Q9UEW8 545 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 G3BP2Q9UN86 482 aaKnown RBP18.9■□□□□ 0.62
HPS3-204ENST00000462030 PHF24Q9UPV7 400 aa18.9■□□□□ 0.62
HPS3-204ENST00000462030 CRTAMO95727 393 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 PSMB4P28070 264 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 IRF9Q00978 393 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 MAP7Q14244 749 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 TMEM132DQ14C87 1099 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 CNGA3Q16281 694 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 EFCAB12Q6NXP0 572 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 TMEM110Q86TL2 294 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 SNX32Q86XE0 403 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 CERS2Q96G23 380 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 GPR20Q99678 358 aa18.89■□□□□ 0.61
HPS3-204ENST00000462030 WDR55Q9H6Y2 383 aaPredicted RBP18.89■□□□□ 0.61
HPS3-204ENST00000462030 NDUFA13Q9P0J0 144 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms