RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 CFAP52Q8N1V2 620 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 MINDY1Q8N5J2 469 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 ZNF419Q96HQ0 510 aaPredicted RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 RPRD1AQ96P16 312 aaPredicted RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 SLC4A5Q9BY07 1137 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 MKRN2Q9H000 416 aaKnown RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 PCED1AQ9H1Q7 454 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 SGK2Q9HBY8 427 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 WSB2Q9NYS7 404 aaPredicted RBP9.18□□□□□ -0.94
LDB1-203ENST00000461873 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 CLEC4EQ9ULY5 219 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
LDB1-203ENST00000461873 GON4LQ3T8J9 2241 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 KCNU1A8MYU2 1149 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 M0QYT0 321 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 PAPSS1O43252 624 aaPredicted RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 GRAP2O75791 330 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 FSBPO95073 299 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 F9P00740 461 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 IGLV3-27P01718 113 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 MAOBP27338 520 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 SLC6A4P31645 630 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CD70P32970 193 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CSKP41240 450 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 C21orf59P57076 290 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 RPS24P62847 133 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 ECT2LQ008S8 904 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CCDC15Q0P6D6 951 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 SLC14A1Q13336 389 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ZNF177Q13360 481 aaPredicted RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 SLC45A4Q5BKX6 768 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ACBD5Q5T8D3 534 aaPredicted RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 SYPL2Q5VXT5 272 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ERICH1Q86X53 443 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 DEFB106AQ8N104 65 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ZCCHC9Q8N567 271 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 ZNF366Q8N895 744 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.17□□□□□ -0.94
LDB1-203ENST00000461873 C1orf131Q8NDD1 294 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 DEFB124Q8NES8 71 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 SETD7Q8WTS6 366 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 SHC3Q92529 594 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CCDC114Q96M63 670 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CNTNAP3BQ96NU0 1288 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 SPAG5Q96R06 1193 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 CNTNAP3Q9BZ76 1288 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 WDCPQ9H6R7 721 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 USP36Q9P275 1121 aaKnown RBP9.17□□□□□ -0.94
LDB1-203ENST00000461873 HCN2Q9UL51 889 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 NFE2L3Q9Y4A8 694 aa9.17□□□□□ -0.94
LDB1-203ENST00000461873 ADAMTS9Q9P2N4 1935 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 EDDM13A0A1B0GTR0 161 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 A0A1B0GVM2 712 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 TARSL2A2RTX5 802 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 TCAF2A6NFQ2 919 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 LRRC72A6NJI9 287 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 METTL12A8MUP2 240 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 FOXN3O00409 490 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 CDX4O14627 284 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 RNASEH2AO75792 299 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 TRIM16O95361 564 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 SEMA4FO95754 770 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 NOS2P35228 1153 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 MATKP42679 507 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 RPL34P49207 117 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 SULT1E1P49888 294 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 AFF3P51826 1226 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 KRT83P78385 493 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 SLC6A3Q01959 620 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 CAMK2GQ13555 558 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 ENPP2Q13822 863 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 DRAP1Q14919 205 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 ST3GAL2Q16842 350 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 INAVAQ3KP66 663 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 DPCR1Q3MIW9 517 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 FAM133BQ5BKY9 247 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 TCP11X2Q5H9J9 407 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 PITRM1Q5JRX3 1037 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 FAM102AQ5T9C2 384 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 FAM46CQ5VWP2 391 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 PEAR1Q5VY43 1037 aaPredicted RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 ADIPOR2Q86V24 386 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 SLC47A2Q86VL8 602 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 SLC41A1Q8IVJ1 513 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 DHX40Q8IX18 779 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 KDM1BQ8NB78 822 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 TTC17Q96AE7 1141 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 C18orf8Q96DM3 657 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 CPXM1Q96SM3 734 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 ZSWIM1Q9BR11 485 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 NAT10Q9H0A0 1025 aaKnown RBP9.16□□□□□ -0.94
LDB1-203ENST00000461873 SIK2Q9H0K1 926 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 MUC3BQ9H195 1237 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 TMEM245Q9H330 911 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 PRSS16Q9NQE7 514 aa9.16□□□□□ -0.94
LDB1-203ENST00000461873 FBXL12Q9NXK8 326 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms