RNA–Protein interactions for RNA: ENST00000461044.5

FXR1-204, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 601 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-204	ENST00000461044	TTC39C	Q8N584	583 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	GPR150	Q8NGU9	434 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PROKR1	Q8TCW9	393 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	SSH3	Q8TE77	659 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	SMCR8	Q8TEV9	937 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	CUL5	Q93034	780 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	SCAMP4	Q969E2	229 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	GRAMD1A	Q96CP6	724 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	VMP1	Q96GC9	406 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	LRIG1	Q96JA1	1093 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	ZBTB45	Q96K62	511 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	KLHL32	Q96NJ5	620 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PRRX2	Q99811	253 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	BAG1	Q99933	345 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	TTPAL	Q9BTX7	342 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	HERC2P3	Q9BVR0	1158 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PHF7	Q9BWX1	381 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PLEKHA2	Q9HB19	425 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	TLR8	Q9NR97	1041 aa	Known RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	RLIM	Q9NVW2	624 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	ZSCAN32	Q9NX65	697 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	ZDHHC7	Q9NXF8	308 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	POGK	Q9P215	609 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	ANKFY1	Q9P2R3	1169 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	CFDP1	Q9UEE9	299 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	MRPS17	Q9Y2R5	130 aa	Known RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	MAP3K2	Q9Y2U5	619 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	USP15	Q9Y4E8	981 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PAXBP1	Q9Y5B6	917 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	ERVK-7	P63135	1459 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	THSD7A	Q9UPZ6	1657 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	GOLGB1	Q14789	3259 aa	Known RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	LAMC1	P11047	1609 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	PTPN23	Q9H3S7	1636 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	RGPD3	A6NKT7	1758 aa	Predicted RBP	3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	RGPD4	Q7Z3J3	1758 aa		3.51	□□□□□ -1.85
FXR1-204	ENST00000461044	CEP152	O94986	1710 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	FAM170A	A1A519	330 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	GAGE12B	A1L429	117 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	GAGE12H	A6NDE8	117 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	AGAP14	A8MT82	685 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	DIRC3	C9JPN6	131 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RNASET2	O00584	256 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	TGFB1I1	O43294	461 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RGS10	O43665	173 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ERAL1	O75616	437 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RPP40	O75818	363 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PIAS2	O75928	621 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	HSPA4L	O95757	839 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	VIP	P01282	170 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SNRPA1	P09661	255 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ACADM	P11310	421 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SERPINA4	P29622	427 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	CD6	P30203	668 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	HOXC13	P31276	330 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	BMPR1A	P36894	532 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ZEB1	P37275	1124 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PAFAH1B1	P43034	410 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RPS3A	P61247	264 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RPP30	P78346	268 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	MPP3	Q13368	585 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	WTAP	Q15007	396 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	GPR68	Q15743	365 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	INSC	Q1MX18	579 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	TIGD2	Q4W5G0	525 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	LY6G5C	Q5SRR4	150 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ZNF362	Q5T0B9	420 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	HECTD3	Q5T447	861 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	CACHD1	Q5VU97	1274 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	KIAA1614	Q5VZ46	1190 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	B3GNTL1	Q67FW5	361 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ABLIM2	Q6H8Q1	611 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ATF7IP	Q6VMQ6	1270 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SLC30A10	Q6XR72	485 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PPP1R32	Q7Z5V6	425 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PXK	Q7Z7A4	578 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	GALNT13	Q8IUC8	556 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RHOT2	Q8IXI1	618 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	CHCHD4	Q8N4Q1	142 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	CPEB3	Q8NE35	698 aa	Known RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ZFP28	Q8NHY6	868 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	TBC1D15	Q8TC07	691 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	BPIFB1	Q8TDL5	484 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	HMGB4	Q8WW32	186 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SLC46A1	Q96NT5	459 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	FUZ	Q9BT04	418 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	FTO	Q9C0B1	505 aa	Known RBP eCLIP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	TTYH3	Q9C0H2	523 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SLC25A32	Q9H2D1	315 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PDCL3	Q9H2J4	239 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SERHL2	Q9H4I8	314 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	BRF2	Q9HAW0	419 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	SYBU	Q9NX95	663 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	ZHX1	Q9UKY1	873 aa	Predicted RBP	3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	RCE1	Q9Y256	329 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	PCDHB7	Q9Y5E2	793 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	CDY1	Q9Y6F8	540 aa		3.5	□□□□□ -1.85
FXR1-204	ENST00000461044	NEXMIF	Q5QGS0	1516 aa		3.49	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms