RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 PCDHB5Q9Y5E4 795 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 SCNN1BP51168 640 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 PTPN20Q4JDL3 420 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 RAB42Q8N4Z0 105 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 TBL1YQ9BQ87 522 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 OR12D3Q9UGF7 316 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 SNCAIPQ9Y6H5 919 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 CRADDP78560 199 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 LRRC74BQ6ZQY2 392 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 OR52K1Q8NGK4 314 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 HIC2Q96JB3 615 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 IL22Q9GZX6 179 aa15.09■□□□□ 0.01
PTPRU-205ENST00000460170 FAM237BA0A1B0GVD1 139 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 HOXA2O43364 376 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 AKR1A1P14550 325 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 BDNFP23560 247 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 ZNF786Q8N393 782 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 AGAP11Q8TF27 550 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 EBNA1BP2Q99848 306 aaKnown RBP15.08■□□□□ 0.01
PTPRU-205ENST00000460170 TINF2Q9BSI4 451 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 ADGRE3Q9BY15 652 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 SIX2Q9NPC8 291 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 EFR3BQ9Y2G0 817 aa15.08■□□□□ 0.01
PTPRU-205ENST00000460170 PARP4Q9UKK3 1724 aaKnown RBP15.08■□□□□ 0.01
PTPRU-205ENST00000460170 HOXC6P09630 235 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 PLIN5Q00G26 463 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 QPCTQ16769 361 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 TCHHL1Q5QJ38 904 aaPredicted RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 KLRG1Q96E93 195 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 YDJCA8MPS7 323 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 B4GALT4O60513 344 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 BST1Q10588 318 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 TMC7Q7Z402 723 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 C12orf29Q8N999 325 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 KANSL3Q9P2N6 904 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 SORCS3Q9UPU3 1222 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 NALCNQ8IZF0 1738 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 C5orf58C9J3I9 102 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 CBX4O00257 560 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 HNRNPRO43390 633 aaKnown RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 MBL2P11226 248 aaPredicted RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 ELAVL2Q12926 359 aaKnown RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 TTC27Q6P3X3 843 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 LRRC8BQ6P9F7 803 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 CRELD2Q6UXH1 353 aaPredicted RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 MON1BQ7L1V2 547 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 MYO1HQ8N1T3 1032 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 CERS2Q96G23 380 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 PRPF18Q99633 342 aaKnown RBP15.08■□□□□ 0
PTPRU-205ENST00000460170 PRDM12Q9H4Q4 367 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 ENTPD7Q9NQZ7 604 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 TRPV2Q9Y5S1 764 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 RAD54BQ9Y620 910 aa15.08■□□□□ 0
PTPRU-205ENST00000460170 ITGALP20701 1170 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 MAP3K10Q02779 954 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ADRM1Q16186 407 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 FSCN1Q16658 493 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 RIN3Q8TB24 985 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 LZICQ8WZA0 190 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PPP2R3CQ969Q6 453 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 LRRC4CQ9HCJ2 640 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 APPL1Q9UKG1 709 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 TCRBV9S1A1TA0A576 114 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ZSCAN9O15535 394 aaPredicted RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 ENDOD1O94919 500 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PROCP04070 461 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
PTPRU-205ENST00000460170 SNX32Q86XE0 403 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 RGS18Q9NS28 235 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 VPS28Q9UK41 221 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PHGDHO43175 533 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 PDE5AO76074 875 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ALDH2P05091 517 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ZNF23P17027 643 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ATP4AP20648 1035 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 OR1E1P30953 314 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PPP3CCP48454 512 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 HADHBP55084 474 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 RHOAP61586 193 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 CHRNB3Q05901 458 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ILF2Q12905 390 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 DMC1Q14565 340 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 SLC35G1Q2M3R5 365 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 KCPQ6ZWJ8 1503 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 A0A1W2PPM1 405 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 SPDYE5A6NIY4 337 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 PIGNO95427 931 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 CACNA2D1P54289 1103 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 HSDL1Q3SXM5 330 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 SPDYE7PQ495Y7 208 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ZBTB49Q6ZSB9 765 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 ACMSDQ8TDX5 336 aa15.07■□□□□ 0
PTPRU-205ENST00000460170 EDF1O60869 148 aaKnown RBP15.07■□□□□ 0
PTPRU-205ENST00000460170 CST3P01034 146 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms