RNA–Protein interactions for RNA: ENST00000460125.1

NUCB1-208, Transcript of nucleobindin 1, humanhuman

TSL 2

Gene NUCB1, Length 528 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-208ENST00000460125 TJP2Q9UDY2 1190 aa11.34□□□□□ -0.59
NUCB1-208ENST00000460125 CCDC39Q9UFE4 941 aa11.34□□□□□ -0.59
NUCB1-208ENST00000460125 HMGXB4Q9UGU5 601 aa11.34□□□□□ -0.59
NUCB1-208ENST00000460125 AHCTF1Q8WYP5 2266 aa11.34□□□□□ -0.59
NUCB1-208ENST00000460125 FLNCQ14315 2725 aa11.34□□□□□ -0.59
NUCB1-208ENST00000460125 A0A1B0GVM2 712 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 SLC12A8A0AV02 714 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 EFSO43281 561 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 LATO43561 262 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 PHACTR2O75167 634 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 GP1BAP07359 652 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 GIMD1P0DJR0 217 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 MYF5P13349 255 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 POLR2EP19388 210 aaKnown RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 SLC8A1P32418 973 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 NDST1P52848 882 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 OVGP1Q12889 678 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 CLN3Q13286 438 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 TRIP4Q15650 581 aaPredicted RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 ISXQ2M1V0 245 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 HNRNPA1L2Q32P51 320 aaKnown RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 RRAGBQ5VZM2 374 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 SND1Q7KZF4 910 aaKnown RBP eCLIP11.33□□□□□ -0.65e-12■■■□□ 18.2
NUCB1-208ENST00000460125 TMC6Q7Z403 805 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 UNC93AQ86WB7 457 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 MMAAQ8IVH4 418 aaKnown RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 LINC00301Q8NCQ3 95 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 ELMO3Q96BJ8 720 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 PLD4Q96BZ4 506 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 TMA16Q96EY4 203 aaKnown RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 PRR11Q96HE9 360 aaPredicted RBP11.33□□□□□ -0.6
NUCB1-208ENST00000460125 USP28Q96RU2 1077 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 LMBRD1Q9NUN5 540 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 MARCH2Q9P0N8 246 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 STRIP2Q9ULQ0 834 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 SATB2Q9UPW6 733 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 PCDHGA8Q9Y5G5 932 aa11.33□□□□□ -0.6
NUCB1-208ENST00000460125 BOD1L1Q8NFC6 3051 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 MYO9AB2RTY4 2548 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 CDRT15L2A8MXV6 281 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 TGFB1I1O43294 461 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 PPP6R2O75170 966 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 MBD3O95983 291 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 GOT1P17174 413 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 CR2P20023 1033 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 DGKAP23743 735 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 ADPRHP54922 357 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 ZNF445P59923 1031 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 UBE2HP62256 183 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 PPP2CBP62714 309 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 PPP2CAP67775 309 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 SERINC3Q13530 473 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 SLC39A14Q15043 492 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 ZSCAN23Q3MJ62 389 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 FOXD4L6Q3SYB3 417 aaPredicted RBP11.32□□□□□ -0.6
NUCB1-208ENST00000460125 HS1BP3Q53T59 392 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 C3orf38Q5JPI3 329 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 FOXD4L3Q6VB84 417 aaPredicted RBP11.32□□□□□ -0.6
NUCB1-208ENST00000460125 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 PRPF39Q86UA1 669 aaKnown RBP11.32□□□□□ -0.6
NUCB1-208ENST00000460125 AADATQ8N5Z0 425 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 OR14C36Q8NHC7 312 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 GRAMD1AQ96CP6 724 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 CYFIP2Q96F07 1278 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 CCNL2Q96S94 520 aaPredicted RBP11.32□□□□□ -0.6
NUCB1-208ENST00000460125 SEMA3CQ99985 751 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 OSBPL2Q9H1P3 480 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 AGPAT3Q9NRZ7 376 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 SEPT3Q9UH03 358 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 STOML2Q9UJZ1 356 aa11.32□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3DA0A087WVF3 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3IA0A087WXS9 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3EA0A087X179 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3KA0A087X1G2 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 LY6G6EA0A0G2JKS1 128 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TARSL2A2RTX5 802 aaKnown RBP11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3FA6NER0 549 aaPredicted RBP11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3LB9A6J9 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 C4BPAP04003 597 aaKnown RBP11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3HP0C7X1 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 SFTPCP11686 197 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 CD70P32970 193 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 BIRC3Q13489 604 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 NCOA4Q13772 614 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 ARID5BQ14865 1188 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 STK38Q15208 465 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 C9orf64Q5T6V5 341 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3GQ6DHY5 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3CQ6IPX1 549 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TBC1D3Q8IZP1 549 aaPredicted RBP11.31□□□□□ -0.6
NUCB1-208ENST00000460125 XXYLT1Q8NBI6 393 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 WFDC5Q8TCV5 224 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 TTC17Q96AE7 1141 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 LMLNQ96KR4 655 aa11.31□□□□□ -0.6
NUCB1-208ENST00000460125 MRGPRX3Q96LB0 322 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms