RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 SYT17Q9BSW7 474 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 CRTAC1Q9NQ79 661 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 DDIT4Q9NX09 232 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 TRAFD1O14545 582 aaPredicted RBP18.63■□□□□ 0.57
HPS3-202ENST00000460120 DAB1O75553 588 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 GNAZP19086 355 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 TYK2P29597 1187 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 FDFT1P37268 417 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 VWA5B1Q5TIE3 1220 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 BZW1Q7L1Q6 419 aaKnown RBP18.63■□□□□ 0.57
HPS3-202ENST00000460120 SLC25A41Q8N5S1 370 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 POU5F2Q8N7G0 328 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 SHKBP1Q8TBC3 707 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 MORF4L1Q9UBU8 362 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 STAP1Q9ULZ2 295 aa18.63■□□□□ 0.57
HPS3-202ENST00000460120 XPOTO43592 962 aaKnown RBP18.62■□□□□ 0.57
HPS3-202ENST00000460120 ITGA2BP08514 1039 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 FAM200BP0CF97 657 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 NOS2P35228 1153 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 TPI1P60174 286 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 THOC5Q13769 683 aaKnown RBP18.62■□□□□ 0.57
HPS3-202ENST00000460120 DLG2Q15700 870 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 LRRC8BQ6P9F7 803 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 C10orf107Q8IVU9 208 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 NPWQ8N729 165 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 GTF3C2Q8WUA4 911 aaPredicted RBP18.62■□□□□ 0.57
HPS3-202ENST00000460120 WNT8BQ93098 351 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 PNPLA4P41247 253 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 SERPINB9P50453 376 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 CLCNKBP51801 687 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 PDK1Q15118 436 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 ATG14Q6ZNE5 492 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 SENP8Q96LD8 212 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 PPP1R36Q96LQ0 422 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 C7orf26Q96N11 449 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 NPY6RQ99463 290 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 HNRNPABQ99729 332 aaKnown RBP18.62■□□□□ 0.57
HPS3-202ENST00000460120 PNPOQ9NVS9 261 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 KCNK4Q9NYG8 393 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 TMEM216Q9P0N5 145 aa18.62■□□□□ 0.57
HPS3-202ENST00000460120 DNAJC6O75061 913 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 FYNP06241 537 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 HOXD8P13378 290 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 PGAM1P18669 254 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 CERCAMQ5T4B2 595 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 TRIM42Q8IWZ5 723 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 RBM15BQ8NDT2 890 aaKnown RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 ZNF778Q96MU6 729 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 WWP1Q9H0M0 922 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 FAM124BQ9H5Z6 455 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 GNEQ9Y223 722 aaKnown RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 MBLAC1A4D2B0 266 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 KLF11O14901 512 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 PPP1R12AO14974 1030 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 ZBTB24O43167 697 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 OPHN1O60890 802 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 SRGAP2BP0DMP2 458 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 NIPAL4Q0D2K0 466 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 WASHC2DQ5SRD0 308 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 C4orf22Q6V702 233 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 MICAL1Q8TDZ2 1067 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 RNF34Q969K3 372 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 PCED1BQ96HM7 432 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 THTPAQ9BU02 230 aa18.61■□□□□ 0.57
HPS3-202ENST00000460120 OXCT2Q9BYC2 517 aaPredicted RBP18.61■□□□□ 0.57
HPS3-202ENST00000460120 KCNE1P15382 129 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 SLC1A6P48664 564 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 PEX6Q13608 980 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 C3orf58Q8NDZ4 430 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 MFSD3Q96ES6 412 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 NAF1Q96HR8 494 aaKnown RBP18.6■□□□□ 0.57
HPS3-202ENST00000460120 PARK7Q99497 189 aaKnown RBP18.6■□□□□ 0.57
HPS3-202ENST00000460120 SMOQ99835 787 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 TLE6Q9H808 572 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 TRIP12Q14669 1992 aaPredicted RBP18.6■□□□□ 0.57
HPS3-202ENST00000460120 C17orf102A2RUQ5 167 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 HACD1B0YJ81 288 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 GSTA2P09210 222 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 ADRA1BP35368 520 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 IRF9Q00978 393 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 MUM1Q2TAK8 710 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 HSP90AA5PQ58FG0 334 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 KDELC2Q7Z4H8 507 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 STRA8Q7Z7C7 330 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 SPNS2Q8IVW8 549 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 STMN2Q93045 179 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 FERMT1Q9BQL6 677 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 SYT15Q9BQS2 421 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 SIK2Q9H0K1 926 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 TSPYL2Q9H2G4 693 aaPredicted RBP18.6■□□□□ 0.57
HPS3-202ENST00000460120 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
HPS3-202ENST00000460120 ZNF638Q14966 1978 aaKnown RBP18.6■□□□□ 0.57
HPS3-202ENST00000460120 GSRP00390 522 aa18.59■□□□□ 0.57
HPS3-202ENST00000460120 POLBP06746 335 aa18.59■□□□□ 0.57
HPS3-202ENST00000460120 PTPN3P26045 913 aa18.59■□□□□ 0.57
HPS3-202ENST00000460120 NUMBP49757 651 aa18.59■□□□□ 0.57
HPS3-202ENST00000460120 ITGA9Q13797 1035 aa18.59■□□□□ 0.57
HPS3-202ENST00000460120 MARK2Q7KZI7 788 aaKnown RBP18.59■□□□□ 0.57
HPS3-202ENST00000460120 PLD6Q8N2A8 252 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms