RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 TTC17Q96AE7 1141 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 NUP58Q9BVL2 599 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 PDCL3Q9H2J4 239 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 PRSS16Q9NQE7 514 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 TAB2Q9NYJ8 693 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 SLC12A6Q9UHW9 1150 aa21.62■■□□□ 1.05
SRM-202ENST00000459997 INTS6Q9UL03 887 aaKnown RBP21.62■■□□□ 1.05
SRM-202ENST00000459997 ADAMTS9Q9P2N4 1935 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 KCNU1A8MYU2 1149 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 F5H5T6 163 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 H0Y626 953 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 SLC2A3P11169 496 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 ABCB4P21439 1286 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 MAOBP27338 520 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 CCR1P32246 355 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 ST8SIA6P61647 398 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 SLC6A3Q01959 620 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 PITRM1Q5JRX3 1037 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 SH3PXD2AQ5TCZ1 1133 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 CADM4Q8NFZ8 388 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 ENOX1Q8TC92 643 aaKnown RBP21.61■■□□□ 1.05
SRM-202ENST00000459997 FBRSQ9HAH7 460 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 SUSD2Q9UGT4 822 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 PCDH15Q96QU1 1955 aa21.61■■□□□ 1.05
SRM-202ENST00000459997 GIPC1O14908 333 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 DAB1O75553 588 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 ASLP04424 464 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 UCHL3P15374 230 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 CYP11B1P15538 503 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 GNSP15586 552 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 PI4KAP42356 2102 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 PLEKHG6Q3KR16 790 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 SLC26A9Q7LBE3 791 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 TMEM35BQ8NCS4 154 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 NAA15Q9BXJ9 866 aaKnown RBP21.6■■□□□ 1.05
SRM-202ENST00000459997 KIAA1522Q9P206 1035 aaPredicted RBP21.6■■□□□ 1.05
SRM-202ENST00000459997 SUN2Q9UH99 717 aa21.6■■□□□ 1.05
SRM-202ENST00000459997 GON4LQ3T8J9 2241 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 CNOT1A5YKK6 2376 aaKnown RBP21.59■■□□□ 1.05
SRM-202ENST00000459997 ARHGAP33O14559 1287 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 MOCS3O95396 460 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 RPS14P62263 151 aaKnown RBP21.59■■□□□ 1.05
SRM-202ENST00000459997 NME3Q13232 169 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 DCAF12L1Q5VU92 463 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 TAF3Q5VWG9 929 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 RBM43Q6ZSC3 357 aaKnown RBP21.59■■□□□ 1.05
SRM-202ENST00000459997 CIR1Q86X95 450 aaPredicted RBP21.59■■□□□ 1.05
SRM-202ENST00000459997 MYO19Q96H55 970 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 CNTNAP3BQ96NU0 1288 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 PRMT1Q99873 361 aaKnown RBP21.59■■□□□ 1.05
SRM-202ENST00000459997 CNTNAP3Q9BZ76 1288 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 MTG2Q9H4K7 406 aa21.59■■□□□ 1.05
SRM-202ENST00000459997 FAM170AA1A519 330 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 DNTTP04053 509 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 SYPP08247 313 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 CSRP1P21291 193 aaKnown RBP21.58■■□□□ 1.05
SRM-202ENST00000459997 RABGAP1LQ5R372 815 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 TTC39BQ5VTQ0 682 aaPredicted RBP21.58■■□□□ 1.05
SRM-202ENST00000459997 CDKAL1Q5VV42 579 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 ZDHHC17Q8IUH5 632 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 MINDY1Q8N5J2 469 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 ZNF397Q8NF99 534 aaPredicted RBP21.58■■□□□ 1.05
SRM-202ENST00000459997 DNASE2BQ8WZ79 361 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 MRGPRX3Q96LB0 322 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 MIR1-1HGQ9H1L0 117 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 VPS16Q9H269 839 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 ERVW-1Q9UQF0 538 aa21.58■■□□□ 1.05
SRM-202ENST00000459997 METTL12A8MUP2 240 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 F8VZ95 297 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 M0QYT0 321 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 MBD3O95983 291 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 C7P10643 843 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 CEACAM1P13688 526 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 PMLP29590 882 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 CDH5P33151 784 aaPredicted RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 NOS2P35228 1153 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 CTSOP43234 321 aaPredicted RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 RNASE9P60153 205 aaKnown RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 ZBTB16Q05516 673 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 KRT31Q15323 416 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 HNRNPA1L2Q32P51 320 aaKnown RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 ZNF776Q68DI1 518 aaPredicted RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 NOP9Q86U38 636 aaKnown RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 APCDD1Q8J025 514 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 CCAR2Q8N163 923 aaKnown RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 HDDC3Q8N4P3 179 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 ZCCHC9Q8N567 271 aaKnown RBP21.57■■□□□ 1.04
SRM-202ENST00000459997 DEFB124Q8NES8 71 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 OR2I1PQ8NGU4 316 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 STK33Q9BYT3 514 aa21.57■■□□□ 1.04
SRM-202ENST00000459997 A0A1B0GTW7 788 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 A0A1B0GVM2 712 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 TCAF2A6NFQ2 919 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 OPHN1O60890 802 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 SIN3BO75182 1162 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 TPM2P07951 284 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 SRPRAP08240 638 aaKnown RBP21.56■■□□□ 1.04
SRM-202ENST00000459997 ACSL1P33121 698 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 MATKP42679 507 aa21.56■■□□□ 1.04
SRM-202ENST00000459997 ECT2LQ008S8 904 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms