RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 TUBB4AP04350 444 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 RHOP08100 348 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 ADRA1BP35368 520 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 CXCR3P49682 368 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 CDH6P55285 790 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 TEAD2Q15562 447 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 HADHQ16836 314 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 RARS2Q5T160 578 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 HECTD3Q5T447 861 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 SYCP2LQ5T4T6 812 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 ERMARDQ5T6L9 678 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 C11orf74Q86VG3 221 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 KATNAL2Q8IYT4 538 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 SHKBP1Q8TBC3 707 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 TRMT2BQ96GJ1 504 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 ZSWIM3Q96MP5 696 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 L2HGDHQ9H9P8 463 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 FZD10Q9ULW2 581 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 R3HDM2Q9Y2K5 976 aaKnown RBP10.67□□□□□ -0.7
USP39-210ENST00000459775 TMEM98Q9Y2Y6 226 aa10.67□□□□□ -0.7
USP39-210ENST00000459775 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 GOLGA6L7A0A1B0GV03 622 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 FAM86C2PA6NEL3 165 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 GOT1P17174 413 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TCP1P17987 556 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 KDELR1P24390 212 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 HSD3B2P26439 372 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 L1CAMP32004 1257 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ARSEP51690 589 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 C2orf54Q08AI8 447 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ACAP1Q15027 740 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 CLUL1Q15846 466 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 SEPT7Q16181 437 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 TBC1D25Q3MII6 688 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ACBD5Q5T8D3 534 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 FAAH2Q6GMR7 532 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 PDE12Q6L8Q7 609 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 SPOCD1Q6ZMY3 1216 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ITIH5Q86UX2 942 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 CMASQ8NFW8 434 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 ITFG1Q8TB96 612 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ATG4AQ8WYN0 398 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 MYEOVQ96EZ4 313 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 FCRL2Q96LA5 508 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 SLC46A2Q9BY10 475 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 EPC1Q9H2F5 836 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 C10orf88Q9H8K7 445 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ASAH2Q9NR71 780 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 PRKAG3Q9UGI9 489 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 MKL2Q9ULH7 1088 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 CCL26Q9Y258 94 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ATP8A1Q9Y2Q0 1164 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
USP39-210ENST00000459775 PRSS47A8MTI9 375 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TRDMT1O14717 391 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 PAGE1O75459 146 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 MTRF1O75570 445 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 OAS1P00973 400 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 KLKB1P03952 638 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 SRGAP2BP0DMP2 458 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 C7P10643 843 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 PRLRP16471 622 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 HDCP19113 662 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ATP5C1P36542 298 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 CDKN2BP42772 138 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 IRAK1P51617 712 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 DPYSL3Q14195 570 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TOMM20Q15388 145 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 LONRF2Q1L5Z9 754 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 LRRC38Q5VT99 294 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 MSANTD2Q6P1R3 559 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TP53INP2Q8IXH6 220 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ELMOD1Q8N336 334 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 ARHGAP18Q8N392 663 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TEX19Q8NA77 164 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 NOA1Q8NC60 698 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 SMG7Q92540 1137 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 TSC1Q92574 1164 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 TBC1D31Q96DN5 1066 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 PGAP3Q96FM1 320 aaPredicted RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 LMAN2LQ9H0V9 348 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 CARD9Q9H257 536 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 RBM12Q9NTZ6 932 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
USP39-210ENST00000459775 CPSF2Q9P2I0 782 aaKnown RBP10.66□□□□□ -0.7
USP39-210ENST00000459775 VCANP13611 3396 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 KRT7P08729 469 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 PTPN2P17706 415 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 AMPD1P23109 780 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 NHLH1Q02575 133 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 KRT81Q14533 505 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 BOLA3Q53S33 107 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 ARTNQ5T4W7 220 aa10.65□□□□□ -0.7
USP39-210ENST00000459775 C10orf62Q5T681 223 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms