RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 SHC2P98077 582 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 B4GALNT1Q00973 533 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 RNASELQ05823 741 aaKnown RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 MTX1Q13505 466 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 TRIM14Q14142 442 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 RPS6KA2Q15349 733 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 TANGO2Q6ICL3 276 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF793Q6ZN11 406 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 PIP4P1Q86T03 277 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ADGRF3Q8IZF5 1079 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 CACNA2D3Q8IZS8 1091 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 PAQR4Q8N4S7 273 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ARFGAP1Q8N6T3 406 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 SLC44A5Q8NCS7 719 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 OR52N4Q8NGI2 321 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 SCAMP5Q8TAC9 235 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 MPLKIPQ8TAP9 179 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 OTUD7AQ8TE49 926 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 CPT1BQ92523 772 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 HMCESQ96FZ2 354 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 LTV1Q96GA3 475 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF48Q96MX3 618 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF347Q96SE7 839 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 NPAS1Q99742 590 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 TMEM120AQ9BXJ8 343 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ELAC1Q9H777 363 aaKnown RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 PRDM8Q9NQV8 689 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 HEY2Q9UBP5 337 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 DAPP1Q9UN19 280 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 C19orf53Q9UNZ5 99 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 HS3ST3B1Q9Y662 390 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 COMMD10Q9Y6G5 202 aa3.38□□□□□ -1.87
SCARNA18-201ENST00000459004 TRBV5-3A0A0A0MS03 114 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 LY6G6EA0A0G2JKS1 128 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 DPPA5A6NC42 116 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 UGDHO60701 494 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PEPDP12955 493 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 ME1P48163 572 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PCP4P48539 62 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 ADPRHP54922 357 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PGM5Q15124 567 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PDCD2Q16342 344 aaPredicted RBP3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 GPR162Q16538 588 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 TTC22Q5TAA0 569 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 ISM2Q6H9L7 571 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 SULT6B1Q6IMI4 303 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 ERAP2Q6P179 960 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 CCDC174Q6PII3 467 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 EXD3Q8N9H8 876 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 STT3BQ8TCJ2 826 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 C3orf49Q96BT1 292 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PIMREGQ9BSJ6 248 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 DDX23Q9BUQ8 820 aaKnown RBP3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 SORBS1Q9BX66 1292 aaKnown RBP3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 NDUFAF4Q9P032 175 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 SLC8A2Q9UPR5 921 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 PCDHA10Q9Y5I2 948 aa3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 COPG1Q9Y678 874 aaKnown RBP3.37□□□□□ -1.87
SCARNA18-201ENST00000459004 KIR2DS5A0A0G2JLQ3 304 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 hCG_1642624A0A1W2PR95 340 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 KIR2DS3K7RE56 304 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 TLX3O43711 291 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 NFATC1O95644 943 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 BMP15O95972 392 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 LDHAP00338 332 aaKnown RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 IGKV2-30P06310 120 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 SERPINA4P29622 427 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 CIITAP33076 1130 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 RCAN1P53805 252 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 PNLIPRP1P54315 467 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 DLGAP5Q15398 846 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 MIDNQ504T8 468 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 C10orf76Q5T2E6 689 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 C10orf62Q5T681 223 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 LIN54Q6MZP7 749 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 LRIG3Q6UXM1 1119 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 PIM3Q86V86 326 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 NRACQ8N912 160 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 CLEC4CQ8WTT0 213 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 ATP2A3Q93084 1043 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 CLMNQ96JQ2 1002 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 TRAPPC9Q96Q05 1148 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 PAGR1Q9BTK6 254 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 OSBPL5Q9H0X9 879 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 MAGEH1Q9H213 219 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 FOXP1Q9H334 677 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 TXNRD2Q9NNW7 524 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 POT1Q9NUX5 634 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 AGO2Q9UKV8 859 aaKnown RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 TNFSF13BQ9Y275 285 aa3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 TTBK1Q5TCY1 1321 aaPredicted RBP3.36□□□□□ -1.87
SCARNA18-201ENST00000459004 AGAP5A6NIR3 686 aa3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 KCNJ18B7U540 433 aa3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 ZNF814B7Z6K7 855 aa3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 MCIDASD6RGH6 385 aa3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 HNRNPRO43390 633 aaKnown RBP3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 TULP3O75386 442 aa3.35□□□□□ -1.87
SCARNA18-201ENST00000459004 CHKAP35790 457 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms