RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TPP1O14773 563 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 PDE5AO76074 875 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SORBS2O94875 1100 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 IL18RAPO95256 599 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ASLP04424 464 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 DESP17661 470 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ARRB2P32121 409 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FDFT1P37268 417 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ABCE1P61221 599 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 CREB5Q02930 508 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FOLH1Q04609 750 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TBL3Q12788 808 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 TRIP10Q15642 601 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 LRRC36Q1X8D7 754 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 CCDC14Q49A88 953 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 C16orf46Q6P387 395 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MPZL3Q6UWV2 235 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 PACS1Q6VY07 963 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FRMD7Q6ZUT3 714 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FAM183BPQ6ZVS7 135 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TMC7Q7Z402 723 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ARPINQ7Z6K5 226 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TMEM110Q86TL2 294 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SATL1Q86VE3 508 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 RNF168Q8IYW5 571 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 DEFB107AQ8IZN7 70 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ARL10Q8N8L6 244 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ICA1LQ8NDH6 482 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ATP2A3Q93084 1043 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 RTKNQ9BST9 563 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 C2orf40Q9H1Z8 148 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FAM124BQ9H5Z6 455 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 ACAD9Q9H845 621 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 CYP3A43Q9HB55 503 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 GBA2Q9HCG7 927 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 PNPOQ9NVS9 261 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TUBA8Q9NY65 449 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 HMGXB4Q9UGU5 601 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 GTF2IRD1Q9UHL9 959 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ARHGAP26Q9UNA1 814 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 HEY1Q9Y5J3 304 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SHROOM3Q8TF72 1996 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ZNF236Q9UL36 1845 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MCM3APO60318 1980 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 A6NJR5 290 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 GPR25O00155 361 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 ZBTB7AO95365 584 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 CAPNS1P04632 268 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SPATA31D3P0C874 917 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 COX4I1P13073 169 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ETS2P15036 469 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ZFXP17010 805 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 ATICP31939 592 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MAGEA12P43365 314 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 RPL5P46777 297 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 ALDH1A3P47895 512 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 NR2C2P49116 596 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SCNN1BP51168 640 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 BACE1P56817 501 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 LAMTOR4Q0VGL1 99 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MAP7Q14244 749 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MXD4Q14582 209 aaPredicted RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 STXBP2Q15833 593 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 USP41Q3LFD5 358 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 FSCBQ5H9T9 825 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 METTL21CQ5VZV1 264 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 EPGNQ6UW88 154 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SPATA31D4Q6ZUB0 917 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 LCA5Q86VQ0 697 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 HPS6Q86YV9 775 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TICAM1Q8IUC6 712 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 C1orf127Q8N9H9 656 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 AFG1LQ8WV93 481 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 ISL2Q96A47 359 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 KLRG1Q96E93 195 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 PIWIL1Q96J94 861 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 C12orf42Q96LP6 360 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.01
VPS50-208ENST00000458707 SNRNP25Q9BV90 132 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 XPNPEP3Q9NQH7 507 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 COPG2Q9UBF2 871 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 MORF4L1Q9UBU8 362 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 VPS28Q9UK41 221 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 RAB26Q9ULW5 256 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 PRPF19Q9UMS4 504 aaKnown RBP8.72□□□□□ -1.01
VPS50-208ENST00000458707 RABL2BQ9UNT1 228 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 INPP5FQ9Y2H2 1132 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 TSC2P49815 1807 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 SBF1O95248 1867 aa8.72□□□□□ -1.01
VPS50-208ENST00000458707 IGKV6-21A0A0C4DH24 114 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 ACKR2O00590 384 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 VILLO15195 856 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 DNAJA2O60884 412 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 FARP2O94887 1054 aaPredicted RBP8.71□□□□□ -1.01
VPS50-208ENST00000458707 FBXO21O94952 628 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 TFAP2AP05549 437 aa8.71□□□□□ -1.01
VPS50-208ENST00000458707 PFKMP08237 780 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms