RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 GRTP1Q5TC63 336 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 CYP4Z2PQ8N1L4 340 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 BTBD10Q9BSF8 475 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 NDUFAF1Q9Y375 327 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 FCHO1O14526 889 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 DCXO43602 365 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 FASP25445 335 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 STK32CQ86UX6 486 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 CNPY3Q9BT09 278 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 TBC1D13Q9NVG8 400 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 DYRK3O43781 588 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 FNDC3BQ53EP0 1204 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 SPATA20Q8TB22 786 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 CDRT15Q96T59 188 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 KLHL3Q9UH77 587 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 DRG1Q9Y295 367 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 TM9SF1O15321 606 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 EGFRP00533 1210 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 TYMPP19971 482 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 KLRC2P26717 231 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 MAGEA10P43363 369 aaPredicted RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 CD151P48509 253 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 ANXA11P50995 505 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 LSM3P62310 102 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 Q4G0T1 1027 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 MILR1Q7Z6M3 343 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 CERKQ8TCT0 537 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 GRIN3AQ8TCU5 1115 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 EMILIN2Q9BXX0 1053 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 CROTQ9UKG9 612 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 MUTP22033 750 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 NUP107P57740 925 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 TROAPQ12815 778 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 COL26A1Q96A83 441 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 RAD21L1Q9H4I0 556 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 ATP13A1Q9HD20 1204 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 TALDO1P37837 337 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 HK2P52789 917 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 SRP54P61011 504 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 DLG4P78352 724 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 ZIK1Q3SY52 487 aaPredicted RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 MARC1Q5VT66 337 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 RNASE11Q8TAA1 199 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 GRIP2Q9C0E4 1043 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 A2ML1A8K2U0 1454 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 EIF2S1P05198 315 aaKnown RBP20.05■□□□□ 0.8
SNX27-204ENST00000458013 PAX7P23759 505 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 MGAT5Q09328 741 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 TXNRD3Q86VQ6 643 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 ACP6Q9NPH0 428 aa20.05■□□□□ 0.8
SNX27-204ENST00000458013 BCL10O95999 233 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 GHRP10912 638 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 PECAM1P16284 738 aaPredicted RBP20.04■□□□□ 0.8
SNX27-204ENST00000458013 CYP2A7P20853 494 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 VPS33AQ96AX1 596 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SYT15Q9BQS2 421 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 POLR1BQ9H9Y6 1135 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 BDNFP23560 247 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 C3orf20Q8ND61 904 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 NARS2Q96I59 477 aaKnown RBP20.04■□□□□ 0.8
SNX27-204ENST00000458013 BBS4Q96RK4 519 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 HGH1Q9BTY7 390 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 OSBPL6Q9BZF3 934 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 POLR1DQ9Y2S0 133 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 RARAP10276 462 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SREBF1P36956 1147 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 FBXO47Q5MNV8 452 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SCIMPQ6UWF3 145 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SV2AQ7L0J3 742 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SLC2A14Q8TDB8 520 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 SHBGP04278 402 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 PDIA6Q15084 440 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 MFSD7Q6UXD7 560 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 TSHZ1Q6ZSZ6 1077 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 TMC7Q7Z402 723 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 LOC100506127A0A0U1RQW1 187 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 PGAM1P18669 254 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 STX4Q12846 297 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 C1DQ13901 141 aaKnown RBP20.04■□□□□ 0.8
SNX27-204ENST00000458013 PAPD7Q5XG87 772 aaKnown RBP20.04■□□□□ 0.8
SNX27-204ENST00000458013 NDNQ99608 321 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 STARD7Q9NQZ5 370 aa20.04■□□□□ 0.8
SNX27-204ENST00000458013 LHX1P48742 406 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 MRPS22P82650 360 aaKnown RBP20.03■□□□□ 0.8
SNX27-204ENST00000458013 CCNG2Q16589 344 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 SLC22A9Q8IVM8 553 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 MROH8Q9H579 483 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 XPNPEP3Q9NQH7 507 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 A0A096LPK6 155 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 SKIV2L2P42285 1042 aaKnown RBP20.03■□□□□ 0.8
SNX27-204ENST00000458013 CRATP43155 626 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 C16orf62Q7Z3J2 963 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 HTR3CQ8WXA8 447 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 PHACTR1Q9C0D0 580 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 TKTL2Q9H0I9 626 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 SPATA31A1Q5TZJ5 1347 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 INSRRP14616 1297 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 BACE1P56817 501 aa20.03■□□□□ 0.8
SNX27-204ENST00000458013 HNRNPLLQ8WVV9 542 aaKnown RBP20.03■□□□□ 0.8
SNX27-204ENST00000458013 DCLRE1BQ9H816 532 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms