RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	ZACN	Q401N2	412 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	SHC4	Q6S5L8	630 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	KDM7A	Q6ZMT4	941 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	GOLGA5	Q8TBA6	731 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	TTC9	Q92623	222 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	TMA16	Q96EY4	203 aa	Known RBP	13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	MED8	Q96G25	268 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	SERAC1	Q96JX3	654 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	NEUROG2	Q9H2A3	272 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	CUEDC2	Q9H467	287 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	STOML2	Q9UJZ1	356 aa		13.71	□□□□□ -0.21
SNHG17-208	ENST00000456953	RNASEH2A	O75792	299 aa	Known RBP	13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	LATS1	O95835	1130 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	SLFN14	P0C7P3	912 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	ERVPABLB-1	P60509	514 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	YWHAG	P61981	247 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	UBE2H	P62256	183 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	EHHADH	Q08426	723 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	VAC14	Q08AM6	782 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	ADGRF1	Q5T601	910 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	RESP18	Q5W5W9	173 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	SPOPL	Q6IQ16	392 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	KCNE4	Q8WWG9	221 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	OMD	Q99983	421 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	DPH1	Q9BZG8	443 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	MTG2	Q9H4K7	406 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	CYP3A43	Q9HB55	503 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953	PCDHB1	Q9Y5F3	818 aa		13.7	□□□□□ -0.22
SNHG17-208	ENST00000456953		A0A1W2PP55	124 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	MID1	O15344	667 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	KLK10	O43240	276 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	SIN3B	O75182	1162 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	MPO	P05164	745 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	PFKFB1	P16118	471 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	PIK3CA	P42336	1068 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	CSRP3	P50461	194 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	ST8SIA6	P61647	398 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	ZNF211	Q13398	564 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	ARID5B	Q14865	1188 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	E2F4	Q16254	413 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	KNOP1	Q1ED39	458 aa	Known RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	MPP7	Q5T2T1	576 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	SV2A	Q7L0J3	742 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	ZNF557	Q8N988	423 aa	Predicted RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	MFSD2A	Q8NA29	543 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	MYO19	Q96H55	970 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	UBXN6	Q9BZV1	441 aa		13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	OLA1	Q9NTK5	396 aa	Known RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	HBS1L	Q9Y450	684 aa	Known RBP	13.69	□□□□□ -0.22
SNHG17-208	ENST00000456953	TLN1	Q9Y490	2541 aa	Known RBP	13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953		A0A1B0GVL5	298 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	IKBKB	O14920	756 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	LAT	O43561	262 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	SIGLEC6	O43699	453 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	GADD45B	O75293	160 aa	Predicted RBP	13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	CD70	P32970	193 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	SYK	P43405	635 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	LSS	P48449	732 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	ADPRH	P54922	357 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	GABRE	P78334	506 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	DLG4	P78352	724 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	OVGP1	Q12889	678 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	RAB41	Q5JT25	222 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	CDCP2	Q5VXM1	449 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	NAPEPLD	Q6IQ20	393 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	UNC13D	Q70J99	1090 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	IQCH	Q86VS3	1027 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	SPATS2	Q86XZ4	545 aa	Known RBP	13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	LURAP1L	Q8IV03	231 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	MMAA	Q8IVH4	418 aa	Known RBP	13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	KDM1B	Q8NB78	822 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	TMEM174	Q8WUU8	243 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	TTC17	Q96AE7	1141 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	C7orf25	Q9BPX7	421 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	IRX2	Q9BZI1	471 aa	Predicted RBP	13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	IMPG2	Q9BZV3	1241 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	POLR1B	Q9H9Y6	1135 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	THSD1	Q9NS62	852 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	DMAC2	Q9NW81	257 aa		13.68	□□□□□ -0.22
SNHG17-208	ENST00000456953	LRRK2	Q5S007	2527 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	TRIM38	O00635	465 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	MAGEC1	O60732	1142 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	ZBED1	O96006	694 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	HLA-DRA	P01903	254 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	ASL	P04424	464 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	GOT1	P17174	413 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	CD58	P19256	250 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	SLC8A1	P32418	973 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	SGSH	P51688	502 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	NDUFA8	P51970	172 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	DAB2	P98082	770 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	C9orf64	Q5T6V5	341 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	PM20D1	Q6GTS8	502 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	PIGZ	Q86VD9	579 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	SLC9A9	Q8IVB4	645 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	AADAT	Q8N5Z0	425 aa		13.67	□□□□□ -0.22
SNHG17-208	ENST00000456953	IQUB	Q8NA54	791 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms