RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ARL13BQ3SXY8 428 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 RNF219Q5W0B1 726 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 KIAA1211LQ6NV74 962 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 FBXL22Q6P050 247 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 LRSAM1Q6UWE0 723 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 KIAA1324Q6UXG2 1013 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 ADIPOR2Q86V24 386 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 CCAR2Q8N163 923 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 NT5C3BQ969T7 300 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 PRMT1Q99873 361 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 HAUS4Q9H6D7 363 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 AIPL1Q9NZN9 384 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 A0A1B0GVM2 712 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 TCAF2A6NFQ2 919 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ZNF217O75362 1048 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ASLP04424 464 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 DLDP09622 509 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 C1QBPQ07021 282 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 SPEM2Q0P670 501 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ZNF177Q13360 481 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 PLK5Q496M5 336 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 FIGNQ5HY92 759 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ACBD5Q5T8D3 534 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 DNAJC24Q6P3W2 148 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 KIAA0907Q7Z7F0 614 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 IQCDQ96DY2 449 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 LOXL4Q96JB6 756 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ZC3H10Q96K80 434 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 PRDM16Q9HAZ2 1276 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 ARHGEF38Q9NXL2 777 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 CALCOCO1Q9P1Z2 691 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 SUN2Q9UH99 717 aa18.66■□□□□ 0.58
PDLIM2-215ENST00000456545 CBFA2T2O43439 604 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 GJB6O95452 261 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 ACADMP11310 421 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 NDUFV2P19404 249 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 GPD1P21695 349 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 GGCXP38435 758 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 NNMTP40261 264 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 P2RY2P41231 377 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 CSKP41240 450 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 ATXN1P54253 815 aaKnown RBP18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 PTP4A2Q12974 167 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 SLC12A1Q13621 1099 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 FUT11Q495W5 492 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 FSCBQ5H9T9 825 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 OTUD1Q5VV17 481 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 RNF43Q68DV7 783 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 DCUN1D2Q6PH85 259 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 LPCAT2Q7L5N7 544 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 CIR1Q86X95 450 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 FAM131BQ86XD5 332 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 C3orf20Q8ND61 904 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 JOSD2Q8TAC2 188 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 OLIG1Q8TAK6 271 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 IGSF8Q969P0 613 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 DUSP15Q9H1R2 295 aaPredicted RBP18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 ARRDC1-AS1Q9H2J1 176 aa18.65■□□□□ 0.58
PDLIM2-215ENST00000456545 EML5Q05BV3 1969 aa18.64■□□□□ 0.58
PDLIM2-215ENST00000456545 SIGLEC16A6NMB1 481 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 SRGAP2O75044 1071 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 SKILP12757 684 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 HLA-EP13747 358 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 PRKCHP24723 683 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 RFC1P35251 1148 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 DHPSP49366 369 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 ENPP2Q13822 863 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 C15orf59Q2T9L4 293 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 CCDC14Q49A88 953 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 TDRD12Q587J7 1177 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 PITRM1Q5JRX3 1037 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 TRNP1Q6NT89 227 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 SLC36A4Q6YBV0 504 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 MON1BQ7L1V2 547 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 C14orf80Q86SX3 495 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 VPS36Q86VN1 386 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 MCOLN2Q8IZK6 566 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 RNF214Q8ND24 703 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 PRCCQ92733 491 aaPredicted RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 TTC17Q96AE7 1141 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 VCPIP1Q96JH7 1222 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 C1orf74Q96LT6 269 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 HAPLN3Q96S86 360 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 ADAM33Q9BZ11 813 aa18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 LUC7L2Q9Y383 392 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 BZW2Q9Y6E2 419 aaKnown RBP18.64■□□□□ 0.57
PDLIM2-215ENST00000456545 A0A1W2PQJ5 194 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 C2CD4BA6NLJ0 364 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 NDUFS2O75306 463 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 CLDN11O75508 207 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 PRKCIP41743 596 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 CDH4P55283 916 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 GSCP56915 257 aaPredicted RBP18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 ECT2LQ008S8 904 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 CREB5Q02930 508 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 WDR59Q6PJI9 974 aa18.63■□□□□ 0.57
PDLIM2-215ENST00000456545 ZNF571Q7Z3V5 609 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms