RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SDE2Q6IQ49 451 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 C11orf74Q86VG3 221 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 MFN1Q8IWA4 741 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 LGI2Q8N0V4 545 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 C3orf20Q8ND61 904 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 WFDC5Q8TCV5 224 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 HMGB4Q8WW32 186 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 TBCBQ99426 244 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 ARRDC1-AS1Q9H2J1 176 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 ABCB8Q9NUT2 735 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 SEPT11Q9NVA2 429 aaKnown RBP17.93■□□□□ 0.46
USP39-208ENST00000455732 IFNKQ9P0W0 207 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 PCDHGA5Q9Y5G8 931 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.93■□□□□ 0.46
USP39-208ENST00000455732 ITIH6Q6UXX5 1313 aa17.93■□□□□ 0.46
USP39-208ENST00000455732 NCOR2Q9Y618 2525 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 MED19A0JLT2 244 aaPredicted RBP17.92■□□□□ 0.46
USP39-208ENST00000455732 C2CD4BA6NLJ0 364 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 PRR5-ARHGAP8B1AHC4 643 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 WASH3PC4AMC7 463 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 PAGE1O75459 146 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 ENDOD1O94919 500 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 LUC7L3O95232 432 aaKnown RBP17.92■□□□□ 0.46
USP39-208ENST00000455732 TPM3P06753 285 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 GABRG2P18507 467 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 BCKDHBP21953 392 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 RDXP35241 583 aaKnown RBP17.92■□□□□ 0.46
USP39-208ENST00000455732 ARHGAP8P85298 464 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 DEUP1Q05D60 604 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 CDH18Q13634 790 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 ELF2Q15723 593 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 RSPO4Q2I0M5 234 aaPredicted RBP17.92■□□□□ 0.46
USP39-208ENST00000455732 MAP7D1Q3KQU3 841 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 PLA2G2CQ5R387 149 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 PMS2CLQ68D20 193 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 ACAD10Q6JQN1 1059 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 KIAA1211LQ6NV74 962 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 PRR23CQ6ZRP0 262 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 SND1Q7KZF4 910 aaKnown RBP eCLIP17.92■□□□□ 0.46
USP39-208ENST00000455732 ADIPOR2Q86V24 386 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 SYN2Q92777 582 aaPredicted RBP17.92■□□□□ 0.46
USP39-208ENST00000455732 CACNA2D2Q9NY47 1150 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 STIM2Q9P246 746 aa17.92■□□□□ 0.46
USP39-208ENST00000455732 BCCIPQ9P287 314 aaKnown RBP eCLIP17.92■□□□□ 0.46
USP39-208ENST00000455732 TCRBV5S1A1TA0A578 114 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 RHOBTB1O94844 696 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 ADCY5O95622 1261 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 ZNF806P0C7X5 589 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 TNFAIP3P21580 790 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 SDHBP21912 280 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 CD70P32970 193 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 PTPN9P43378 593 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 AUHQ13825 339 aaKnown RBP17.91■□□□□ 0.46
USP39-208ENST00000455732 C5orf22Q49AR2 442 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 RABGAP1LQ5R372 815 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 FBXL22Q6P050 247 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 CHST9Q7L1S5 443 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 ZNF571Q7Z3V5 609 aaPredicted RBP17.91■□□□□ 0.46
USP39-208ENST00000455732 CCDC117Q8IWD4 279 aaPredicted RBP17.91■□□□□ 0.46
USP39-208ENST00000455732 CFAP52Q8N1V2 620 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 EMC1Q8N766 993 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 FRMD1Q8N878 549 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 RLN3Q8WXF3 142 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 VCPIP1Q96JH7 1222 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 CFAP57Q96MR6 1250 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 CIPCQ9C0C6 399 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 TKTL2Q9H0I9 626 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 HAUS4Q9H6D7 363 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 WDCPQ9H6R7 721 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 CDV3Q9UKY7 258 aaKnown RBP17.91■□□□□ 0.46
USP39-208ENST00000455732 HS3ST4Q9Y661 456 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 STON1Q9Y6Q2 735 aa17.91■□□□□ 0.46
USP39-208ENST00000455732 A0A1B0GVM2 712 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 TCAF2A6NFQ2 919 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 I6L893 689 aaPredicted RBP17.9■□□□□ 0.46
USP39-208ENST00000455732 KRT3P12035 628 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 GZMAP12544 262 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 SDC4P31431 198 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 IL12RB1P42701 662 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 KLHL30Q0D2K2 578 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 LMAN2Q12907 356 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 ZNF234Q14588 700 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 CCDC6Q16204 474 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 FUT11Q495W5 492 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 CCDC14Q49A88 953 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 MCOLN2Q8IZK6 566 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 PGBD3Q8N328 593 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 CARNMT1Q8N4J0 409 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 JOSD2Q8TAC2 188 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 RXFP2Q8WXD0 754 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 TTC17Q96AE7 1141 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 C1orf74Q96LT6 269 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 SELENOOQ9BVL4 669 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 XPO4Q9C0E2 1151 aaKnown RBP17.9■□□□□ 0.46
USP39-208ENST00000455732 ANLNQ9NQW6 1124 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 MBD1Q9UIS9 605 aaPredicted RBP17.9■□□□□ 0.46
USP39-208ENST00000455732 CAPN11Q9UMQ6 739 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 RAD54BQ9Y620 910 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 SPTBN2O15020 2390 aa17.9■□□□□ 0.46
USP39-208ENST00000455732 CNOT1A5YKK6 2376 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms