RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 ZFYVE28Q9HCC9 887 aa15.48■□□□□ 0.07
LDLR-202ENST00000455727 DDIT4Q9NX09 232 aa15.48■□□□□ 0.07
LDLR-202ENST00000455727 SEPT10Q9P0V9 454 aa15.48■□□□□ 0.07
LDLR-202ENST00000455727 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
LDLR-202ENST00000455727 CYP11A1P05108 521 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 POLBP06746 335 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 BPGMP07738 259 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 ODC1P11926 461 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 MX2P20592 715 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 PTPN3P26045 913 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 PTPN4P29074 926 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 RAB27AP51159 221 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 SCNN1GP51170 649 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 FRG1Q14331 258 aaKnown RBP15.47■□□□□ 0.07
LDLR-202ENST00000455727 SPANXN3Q5MJ09 141 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 FAM91A1Q658Y4 838 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 FAM171BQ6P995 826 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 PACS1Q6VY07 963 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 CCDC91Q7Z6B0 441 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 NUDCD3Q8IVD9 361 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 ADAM32Q8TC27 787 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 HDAC11Q96DB2 347 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 PCMTD2Q9NV79 361 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 KCNK4Q9NYG8 393 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 TRHDEQ9UKU6 1024 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 NUMBLQ9Y6R0 609 aa15.47■□□□□ 0.07
LDLR-202ENST00000455727 TDRD15B5MCY1 1934 aaKnown RBP15.47■□□□□ 0.07
LDLR-202ENST00000455727 CBX6O95503 412 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 AP2A1O95782 977 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 CYBAP13498 195 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 CRADDP78560 199 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 OCRLQ01968 901 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 BST1Q10588 318 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 BEND5Q7L4P6 421 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 AGAP11Q8TF27 550 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 VAT1Q99536 393 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 RTP3Q9BQQ7 232 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 TACO1Q9BSH4 297 aaKnown RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 TBC1D10AQ9BXI6 508 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 WDCPQ9H6R7 721 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 SPC25Q9HBM1 224 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 KLHL8Q9P2G9 620 aaPredicted RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 RPL26L1Q9UNX3 145 aaKnown RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 SNNO75324 88 aaPredicted RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 HAUS5O94927 633 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 TMPRSS15P98073 1019 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 GALNT2Q10471 571 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 KRT72Q14CN4 511 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 TEX44Q53QW1 395 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 TP53INP2Q8IXH6 220 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 NETO2Q8NC67 525 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 EPAS1Q99814 870 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 MECRQ9BV79 373 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 TRIM62Q9BVG3 475 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 CEP41Q9BYV8 373 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 AGO3Q9H9G7 860 aaKnown RBP15.46■□□□□ 0.07
LDLR-202ENST00000455727 SYBUQ9NX95 663 aa15.46■□□□□ 0.07
LDLR-202ENST00000455727 NUP205Q92621 2012 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 CASTOR2A6NHX0 329 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 F5H423 210 aaPredicted RBP15.45■□□□□ 0.06
LDLR-202ENST00000455727 KCNK1O00180 336 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 ALDOAP04075 364 aaKnown RBP15.45■□□□□ 0.06
LDLR-202ENST00000455727 CTSHP09668 335 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 SERPINB6P35237 376 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 RABGGTBP53611 331 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 CHI3L2Q15782 390 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 INSCQ1MX18 579 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 METTL23Q86XA0 190 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 SMC1BQ8NDV3 1235 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 MYLPFQ96A32 169 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 LRRC40Q9H9A6 602 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 EBF2Q9HAK2 575 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 DCDC2Q9UHG0 476 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 DSEQ9UL01 958 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 A8MUI8 341 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 GLRA3O75311 464 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 AMHP03971 560 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 ATP5BP06576 529 aaKnown RBP15.45■□□□□ 0.06
LDLR-202ENST00000455727 MYL2P10916 166 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 SERPINB3P29508 390 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 ZNF33AQ06730 810 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 KCTD11Q693B1 232 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 DCLRE1AQ6PJP8 1040 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 NPWQ8N729 165 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.45■□□□□ 0.06
LDLR-202ENST00000455727 ATP2A3Q93084 1043 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 PTCD3Q96EY7 689 aaKnown RBP15.45■□□□□ 0.06
LDLR-202ENST00000455727 NSL1Q96IY1 281 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 GORASP1Q9BQQ3 440 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 GBA3Q9H227 469 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 CASS4Q9NQ75 786 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 XPNPEP3Q9NQH7 507 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 OR12D3Q9UGF7 316 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 PTPRDP23468 1912 aa15.45■□□□□ 0.06
LDLR-202ENST00000455727 A0A0U1RQF3 1178 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 M0QZQ0 153 aa15.44■□□□□ 0.06
LDLR-202ENST00000455727 CCDC22O60826 627 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms