RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TMEM110Q86TL2 294 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 MFN1Q8IWA4 741 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 APCDD1Q8J025 514 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 PRMT1Q99873 361 aaKnown RBP16.64■□□□□ 0.25
GPC1-206ENST00000455111 RSPH9Q9H1X1 276 aaPredicted RBP16.64■□□□□ 0.25
GPC1-206ENST00000455111 GAREM1Q9H706 876 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 TLR6Q9Y2C9 796 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 SNX11Q9Y5W9 270 aa16.64■□□□□ 0.25
GPC1-206ENST00000455111 TTC34A8MYJ7 566 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 WNT9AO14904 365 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 IRAK2O43187 625 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 DKK1O94907 266 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 ACADMP11310 421 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 PAK1Q13153 545 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 NNTQ13423 1086 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 ZC3H12AQ5D1E8 599 aaKnown RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 PITRM1Q5JRX3 1037 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 C9orf64Q5T6V5 341 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 OTUD1Q5VV17 481 aaPredicted RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 RAP1GAP2Q684P5 730 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 CIR1Q86X95 450 aaPredicted RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 MARCH9Q86YJ5 346 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 UNC45BQ8IWX7 931 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 CARNMT1Q8N4J0 409 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 HJURPQ8NCD3 748 aaPredicted RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 OR52K2Q8NGK3 314 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 ADAMTS14Q8WXS8 1223 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 CRACR2AQ9BSW2 395 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 GTPBP4Q9BZE4 634 aaKnown RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 IRX2Q9BZI1 471 aaPredicted RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 TM9SF3Q9HD45 589 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 SIX2Q9NPC8 291 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 UBE2TQ9NPD8 197 aaPredicted RBP16.63■□□□□ 0.25
GPC1-206ENST00000455111 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 SLCO3A1Q9UIG8 710 aa16.63■□□□□ 0.25
GPC1-206ENST00000455111 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 LUC7L3O95232 432 aaKnown RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 SEMA4FO95754 770 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 MOCS2O96007 188 aaPredicted RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 WNT1P04628 370 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 HOXB3P14651 431 aaPredicted RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 VAV1P15498 845 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 POLR2EP19388 210 aaKnown RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 PPP1R2P41236 205 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 SLC11A2P49281 568 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 METAP1P53582 386 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 ARID5AQ03989 594 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 HNRNPA1L2Q32P51 320 aaKnown RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 ARTNQ5T4W7 220 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 TRIM65Q6PJ69 517 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 BEND5Q7L4P6 421 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 GLRX5Q86SX6 157 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 DHX40Q8IX18 779 aaKnown RBP16.62■□□□□ 0.25
GPC1-206ENST00000455111 STK32AQ8WU08 396 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 FAM149B1Q96BN6 582 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 SERPINB11Q96P15 392 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 CPXM1Q96SM3 734 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 FAM129BQ96TA1 746 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 ZDHHC5Q9C0B5 715 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 PCED1AQ9H1Q7 454 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 TM7SF3Q9NS93 570 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 PLA2G4CQ9UP65 541 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 ERVW-1Q9UQF0 538 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.62■□□□□ 0.25
GPC1-206ENST00000455111 ITIH6Q6UXX5 1313 aa16.62■□□□□ 0.25
GPC1-206ENST00000455111 BICDL2A1A5D9 508 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 I6L893 689 aaPredicted RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 TRUB2O95900 331 aaKnown RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 ZNF883P0CG24 379 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 KRT5P13647 590 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 TACR2P21452 398 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 STK19P49842 368 aaPredicted RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 PDCLQ13371 301 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 LGI2Q8N0V4 545 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 AADATQ8N5Z0 425 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 ZCCHC14Q8WYQ9 949 aaKnown RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 SNX19Q92543 992 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 PTPRN2Q92932 1015 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 ALG14Q96F25 216 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 PABPC3Q9H361 631 aaKnown RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 OSGEPQ9NPF4 335 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 ANLNQ9NQW6 1124 aa16.61■□□□□ 0.25
GPC1-206ENST00000455111 HOOK1Q9UJC3 728 aaKnown RBP16.61■□□□□ 0.25
GPC1-206ENST00000455111 KCNU1A8MYU2 1149 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 H0Y8X5 98 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 MID1O15344 667 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ATP5BP06576 529 aaKnown RBP16.6■□□□□ 0.25
GPC1-206ENST00000455111 ATXN1LP0C7T5 689 aaKnown RBP16.6■□□□□ 0.25
GPC1-206ENST00000455111 MZF1P28698 734 aaPredicted RBP16.6■□□□□ 0.25
GPC1-206ENST00000455111 GNA15P30679 374 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 MATKP42679 507 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ZBTB16Q05516 673 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ARID5BQ14865 1188 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 SHBQ15464 509 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 MEA1Q16626 185 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ZNF423Q2M1K9 1284 aa16.6■□□□□ 0.25
GPC1-206ENST00000455111 ZNF776Q68DI1 518 aaPredicted RBP16.6■□□□□ 0.25
GPC1-206ENST00000455111 CXorf57Q6NSI4 855 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms