RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 SLC11A2P49281 568 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 DNAJC3Q13217 504 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 LAMB3Q13751 1172 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SLC29A2Q14542 456 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 KRT71Q3SY84 523 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 MGAT5BQ3V5L5 792 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SPOUT1Q5T280 376 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 HECTD3Q5T447 861 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 C1orf228Q6PIY5 440 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 RNF19BQ6ZMZ0 732 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 CCDC13Q8IYE1 715 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF557Q8N988 423 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SCAMP5Q8TAC9 235 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 DIS3LQ8TF46 1054 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 PYROXD1Q8WU10 500 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 PTCD2Q8WV60 388 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 FCRL2Q96LA5 508 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 RAD9AQ99638 391 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 HTATIP2Q9BUP3 242 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 EMILIN2Q9BXX0 1053 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ZYG11BQ9C0D3 744 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 SEMA4AQ9H3S1 761 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 NINJ2Q9NZG7 142 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 MARCH2Q9P0N8 246 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 CALCOCO1Q9P1Z2 691 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 XPO7Q9UIA9 1087 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 STOML2Q9UJZ1 356 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 AAR2Q9Y312 384 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 OBSL1O75147 1896 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 ALPK3Q96L96 1907 aa7.03□□□□□ -1.28
ECHDC1-210ENST00000454859 WDR27A2RRH5 827 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ARHGAP42A6NI28 874 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 C5orf67F2Z3F1 127 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 RGS16O15492 202 aaPredicted RBP7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ANXA9O76027 345 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 LRIG2O94898 1065 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 PAPLNO95428 1278 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 VNN2O95498 520 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ADH1AP07327 375 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 CSF2RAP15509 400 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 RBL1P28749 1068 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 EPHB2P29323 1055 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 OR1D2P34982 312 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 NPY2RP49146 381 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 MRPS25P82663 173 aaKnown RBP7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 GBE1Q04446 702 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 TAF10Q12962 218 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ANKRD20A2Q5SQ80 823 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 LGSNQ5TDP6 509 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ANKRD20A1Q5TYW2 823 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ANKRD20A3Q5VUR7 823 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 LRRC8BQ6P9F7 803 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 CHST9Q7L1S5 443 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 MAML1Q92585 1016 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 PSMG2Q969U7 264 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ALKBH8Q96BT7 664 aaKnown RBP7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 CLSTN3Q9BQT9 956 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ZBP1Q9H171 429 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 GPATCH2LQ9NWQ4 482 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 GMIPQ9P107 970 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 ZNF180Q9UJW8 692 aa7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 MRPL42Q9Y6G3 142 aaKnown RBP7.02□□□□□ -1.28
ECHDC1-210ENST00000454859 MATN3O15232 486 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 CREB3O43889 395 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 MFSD11O43934 449 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 NR1D1P20393 614 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 HARS2P49590 506 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 LBX1P52954 281 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 IFRD2Q12894 506 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 SLC10A2Q12908 348 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 DUSP4Q13115 394 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 HNRNPDQ14103 355 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 RFTN1Q14699 578 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 TERF2Q15554 542 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 DDR2Q16832 855 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 TEX44Q53QW1 395 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 RALGPS1Q5JS13 557 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 RABGAP1LQ5R372 815 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 METTL3Q86U44 580 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 ZC3H18Q86VM9 953 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 HERC6Q8IVU3 1022 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 ZNF683Q8IZ20 524 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 ELMOD1Q8N336 334 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 ATAD1Q8NBU5 361 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 GABPB2Q8TAK5 448 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 NSMCE1Q8WV22 266 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 SPOCK2Q92563 424 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 EDEM1Q92611 657 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 DPF3Q92784 378 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 CASP10Q92851 521 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 P2RY11Q96G91 374 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 CYTH2Q99418 400 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 SEPT5Q99719 369 aaPredicted RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 PRMT1Q99873 361 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 RHOBTB2Q9BYZ6 727 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 GBA3Q9H227 469 aa7.02□□□□□ -1.29
ECHDC1-210ENST00000454859 PRDM12Q9H4Q4 367 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms