RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 DPF3Q92784 378 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 HDAC11Q96DB2 347 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 MCMBPQ9BTE3 642 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 C20orf27Q9GZN8 174 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 LRRC40Q9H9A6 602 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 GPAMQ9HCL2 828 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 WDR6Q9NNW5 1121 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CNGB3Q9NQW8 809 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 TRHDEQ9UKU6 1024 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PIN4Q9Y237 131 aaKnown RBP12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 IPPQ9Y573 584 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 PTCH2Q9Y6C5 1203 aa12.85□□□□□ -0.35
ECHDC1-209ENST00000454591 CCL15-CCL14A0A0B4J2E2 113 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 MAGEB16A2A368 324 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 A6NHS1 94 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 SPECC1L-ADORA2AF8WAN1 911 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 EEF2KO00418 725 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 PTGESO14684 152 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 TPP1O14773 563 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 SMNDC1O75940 238 aaKnown RBP eCLIP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 USP1O94782 785 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 KLHL2O95198 593 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 F9P00740 461 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 FYNP06241 537 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 AKAP5P24588 427 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 PGM1P36871 562 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 NPY2RP49146 381 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 AQP5P55064 265 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 DAOAP59103 153 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 DEUP1Q05D60 604 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 SLC34A1Q06495 639 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 CCL15Q16663 113 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 DCAF6Q58WW2 860 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 MORN1Q5T089 497 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 BEND5Q7L4P6 421 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 ADGRG6Q86SQ4 1221 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 GPATCH11Q8N954 259 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 SLC7A14Q8TBB6 771 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 TMEM40Q8WWA1 233 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 CERS2Q96G23 380 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 ZNF778Q96MU6 729 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 PARK7Q99497 189 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 GORASP1Q9BQQ3 440 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 LRRC4Q9HBW1 653 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 DONSONQ9NYP3 566 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 FBXW11Q9UKB1 542 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 CORO1CQ9ULV4 474 aaPredicted RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 PATJQ8NI35 1801 aa12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 GOLGB1Q14789 3259 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-209ENST00000454591 B2RBV5 119 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 M0QYT0 321 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PSMD3O43242 534 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 CACNG3O60359 315 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 H2AFYO75367 372 aaKnown RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 IGHA2P01877 340 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 MPOP05164 745 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 MX2P20592 715 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 CYP2B6P20813 491 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PTPN3P26045 913 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PRDX6P30041 224 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 SPRP35270 261 aaPredicted RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 HADHAP40939 763 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 SLC1A6P48664 564 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 LHX1P48742 406 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 SERPINB8P50452 374 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 LIMK2P53671 638 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PITX1P78337 314 aaPredicted RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 MRPS35P82673 323 aaKnown RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 GALNT2Q10471 571 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 IFRD2Q12894 506 aaPredicted RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 HIC1Q14526 733 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 KPNB1Q14974 876 aaKnown RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 C9orf131Q5VYM1 1079 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 CLEC14AQ86T13 490 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 LRRN4Q8WUT4 740 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 DNAJB3Q8WWF6 145 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 IRGQQ8WZA9 623 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 FAM149B1Q96BN6 582 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 RBBP8Q99708 897 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 GBA3Q9H227 469 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PIGVQ9NUD9 493 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 SLC38A7Q9NVC3 462 aa12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 PPARGC1AQ9UBK2 798 aaKnown RBP12.83□□□□□ -0.35
ECHDC1-209ENST00000454591 TRIP12Q14669 1992 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 MYO18AQ92614 2054 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 TRPM7Q96QT4 1865 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ZCWPW2A0A1B0GU75 182 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 C2orf71A6NGG8 1288 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 TMEM114B3SHH9 223 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ZNF195O14628 629 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 NVLO15381 856 aaKnown RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 FAM200BP0CF97 657 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 ERCC2P18074 760 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 PAX3P23760 479 aa12.83□□□□□ -0.36
ECHDC1-209ENST00000454591 HTR7P34969 479 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms