RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PGRMC1O00264 195 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 MUSKO15146 869 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 KRT3P12035 628 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 DDX6P26196 483 aaKnown RBP eCLIP5.13□□□□□ -1.59
RIF1-207ENST00000454583 TIAL1Q01085 375 aaKnown RBP eCLIP5.13□□□□□ -1.591e-6■■□□□ 13.3
RIF1-207ENST00000454583 ACVR1Q04771 509 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 TWF1Q12792 350 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 MMRN1Q13201 1228 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 SPA17Q15506 151 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 EFHC1Q5JVL4 640 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 SDHAF4Q5VUM1 108 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 VITQ6UXI7 678 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 CHST9Q7L1S5 443 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 C12orf40Q86WS4 652 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 NPAS3Q8IXF0 933 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 DCP1BQ8IZD4 617 aaKnown RBP5.13□□□□□ -1.59
RIF1-207ENST00000454583 CNTD1Q8N815 330 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 OR6B3Q8NGW1 331 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 ITFG1Q8TB96 612 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 ARRDC2Q8TBH0 407 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 ECHDC3Q96DC8 303 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 ARFGAP3Q9NP61 516 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 GPR27Q9NS67 375 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 DLGAP2Q9P1A6 1054 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 SSX2IPQ9Y2D8 614 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 STARD13Q9Y3M8 1113 aa5.13□□□□□ -1.59
RIF1-207ENST00000454583 RFXAPO00287 272 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 GAPDHSO14556 408 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 TRAPPC3O43617 180 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 SIN3BO75182 1162 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TBX18O95935 607 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 KRT19P08727 400 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TNFAIP3P21580 790 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ADORA2BP29275 332 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ARF5P84085 180 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TAF10Q12962 218 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 HTR4Q13639 388 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ALFQ53S48 1182 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ERMARDQ5T6L9 678 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ACBD5Q5T8D3 534 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 ZNF783Q6ZMS7 281 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ERICH1Q86X53 443 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TXLNBQ8N3L3 684 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 MNS1Q8NEH6 495 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 FAM172AQ8WUF8 416 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ARNTL2Q8WYA1 636 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 RIN2Q8WYP3 895 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 CENPTQ96BT3 561 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ZNF653Q96CK0 615 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 PKNOX2Q96KN3 472 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ZNF317Q96PQ6 595 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 ERP44Q9BS26 406 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 MAN1C1Q9NR34 630 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 GGA2Q9UJY4 613 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 SLC27A6Q9Y2P4 619 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 PRG3Q9Y2Y8 225 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 AGAP14A8MT82 685 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 WASH3PC4AMC7 463 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TADA2AO75478 443 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 GCATO75600 419 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 RFPL2O75678 378 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 PRLP01236 227 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 RGS7P49802 495 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ZNF135P52742 658 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 SLC7A5Q01650 507 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 FSCBQ5H9T9 825 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 RNASEH2BQ5TBB1 312 aaKnown RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 KDELC1Q6UW63 502 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ARHGAP36Q6ZRI8 547 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 KIAA1328Q86T90 577 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ADGRG2Q8IZP9 1017 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 SGSM3Q96HU1 749 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ALS2CR12Q96Q35 445 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 MLPHQ9BV36 600 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 FRMD8P1Q9BZ68 369 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.12□□□□□ -1.59
RIF1-207ENST00000454583 WHRNQ9P202 907 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 INPP5FQ9Y2H2 1132 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 SNX10Q9Y5X0 201 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ANTXRLA6NF34 631 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 APOC4-APOC2K7ER74 178 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 AKR1B10O60218 316 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 APOC2P02655 101 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 COILP38432 576 aaPredicted RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 MMP13P45452 471 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 NSFP46459 744 aaKnown RBP5.12□□□□□ -1.59
RIF1-207ENST00000454583 SLC18A1P54219 525 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 CREB5Q02930 508 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 PDK2Q15119 407 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 CCNG2Q16589 344 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 LEXMQ3ZCV2 418 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TFDP3Q5H9I0 405 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TCEAL5Q5H9L2 206 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TEX35Q5T0J7 233 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 ARMC3Q5W041 872 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 STEAP4Q687X5 459 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 TMCO3Q6UWJ1 677 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 DENND5BQ6ZUT9 1274 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 CACNA2D4Q7Z3S7 1137 aa5.12□□□□□ -1.59
RIF1-207ENST00000454583 PDZD8Q8NEN9 1154 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms