RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PPM1KQ8N3J5 372 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 UBR7Q8N806 425 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 SLC35C1Q96A29 364 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 TTC17Q96AE7 1141 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 HSFY1Q96LI6 401 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 OMDQ99983 421 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 MIS12Q9H081 205 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 CEP83Q9Y592 693 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 CABIN1Q9Y6J0 2220 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 ACACAQ13085 2346 aa24.63■■□□□ 1.53
LYSMD2-202ENST00000454181 FREM2Q5SZK8 3169 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 GOLGA6L4A6NEF3 574 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 SIN3BO75182 1162 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 IL9RQ01113 521 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 CYP4F3Q08477 520 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 HNRNPA1L2Q32P51 320 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 COBLL1Q53SF7 1204 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 RNF219Q5W0B1 726 aaPredicted RBP24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 DHX40Q8IX18 779 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 SERPINB11Q96P15 392 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 GDPD2Q9HCC8 539 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 DKK4Q9UBT3 224 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 ADAMTS20P59510 1910 aa24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 FASNP49327 2511 aaKnown RBP24.62■■□□□ 1.53
LYSMD2-202ENST00000454181 A0A1W2PPC4 97 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 VILLO15195 856 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 RNASEH2AO75792 299 aaKnown RBP24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 IGHV4-34P06331 123 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 BRD2P25440 801 aaKnown RBP24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 FMO5P49326 533 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 GALCP54803 685 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 NUCB2P80303 420 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 STIM1Q13586 685 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 CST6Q15828 149 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 MARCH9Q86YJ5 346 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 PDCD7Q8N8D1 485 aaKnown RBP24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 SMARCE1Q969G3 411 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 AASDHPPTQ9NRN7 309 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 HOOK1Q9UJC3 728 aaKnown RBP24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 PLXNB3Q9ULL4 1909 aa24.61■■□□□ 1.53
LYSMD2-202ENST00000454181 A0A1W2PP55 124 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 FAM149AA5PLN7 773 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 SART1O43290 800 aaKnown RBP24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 PMS1P54277 932 aaKnown RBP24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 RPS24P62847 133 aaKnown RBP24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 CCDC40Q4G0X9 1142 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 KCNT1Q5JUK3 1230 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 NADSYN1Q6IA69 706 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 NCEH1Q6PIU2 408 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 MMAAQ8IVH4 418 aaKnown RBP24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 KDM1BQ8NB78 822 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 CLEC4CQ8WTT0 213 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 FAM149B1Q96BN6 582 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 SLC6A18Q96N87 628 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 SCUBE2Q9NQ36 999 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 ST7Q9NRC1 585 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 ERVW-1Q9UQF0 538 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 TLR6Q9Y2C9 796 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 APC2O95996 2303 aa24.6■■□□□ 1.53
LYSMD2-202ENST00000454181 ITPR1Q14643 2758 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 A0A1B0GTQ1 180 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 TARSL2A2RTX5 802 aaKnown RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 TRIM49BA6NDI0 452 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 CAPN9O14815 690 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 PSMA7O14818 248 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 MID1O15344 667 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 GABBR2O75899 941 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 MOCS2O96007 188 aaPredicted RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 SRPRAP08240 638 aaKnown RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 ABCB4P21439 1286 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 SLC8A1P32418 973 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 SMAD1Q15797 465 aaKnown RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 MS4A13Q5J8X5 152 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 DHRS13Q6UX07 377 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 CFAP52Q8N1V2 620 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 OR2T34Q8NGX1 318 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 DQX1Q8TE96 717 aaKnown RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 MYO19Q96H55 970 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 LRIG1Q96JA1 1093 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 LMLNQ96KR4 655 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 FCRL2Q96LA5 508 aaPredicted RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 PRICKLE1Q96MT3 831 aaPredicted RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 ELF4Q99607 663 aaPredicted RBP24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 ORAI3Q9BRQ5 295 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 TRIM62Q9BVG3 475 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 NEUROG2Q9H2A3 272 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 FZD4Q9ULV1 537 aa24.59■■□□□ 1.53
LYSMD2-202ENST00000454181 EDDM13A0A1B0GTR0 161 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 RNF225M0QZC1 329 aaPredicted RBP24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 APOEP02649 317 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 ITGAVP06756 1048 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 NNMTP40261 264 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 SLC45A4Q5BKX6 768 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 PITRM1Q5JRX3 1037 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 SCUBE3Q8IX30 993 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 MRGPRX3Q96LB0 322 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 NUCKS1Q9H1E3 243 aaKnown RBP24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 TJP2Q9UDY2 1190 aa24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 INTS6Q9UL03 887 aaKnown RBP24.58■■□□□ 1.53
LYSMD2-202ENST00000454181 PTPRBP23467 1997 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms