RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 RAP1GAP2Q684P5 730 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 OR6B2Q6IFH4 312 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
CHD3-206ENST00000452447 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 SLC47A2Q86VL8 602 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 DEFB106AQ8N104 65 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 C1orf131Q8NDD1 294 aaKnown RBP13.34□□□□□ -0.27
CHD3-206ENST00000452447 MYEOVQ96EZ4 313 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 MIR1-1HGQ9H1L0 117 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 PRSS16Q9NQE7 514 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 COX16Q9P0S2 106 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 KIAA1522Q9P206 1035 aaPredicted RBP13.34□□□□□ -0.27
CHD3-206ENST00000452447 XPO7Q9UIA9 1087 aaKnown RBP13.34□□□□□ -0.27
CHD3-206ENST00000452447 AJAP1Q9UKB5 411 aaPredicted RBP13.34□□□□□ -0.27
CHD3-206ENST00000452447 NFE2L3Q9Y4A8 694 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 PCDH15Q96QU1 1955 aa13.34□□□□□ -0.27
CHD3-206ENST00000452447 MUC22E2RYF6 1773 aaPredicted RBP13.33□□□□□ -0.27
CHD3-206ENST00000452447 METTL12A8MUP2 240 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 KCNU1A8MYU2 1149 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 OPHN1O60890 802 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 GRAP2O75791 330 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 LUC7L3O95232 432 aaKnown RBP13.33□□□□□ -0.28
CHD3-206ENST00000452447 PNMA6AP0CW24 399 aaPredicted RBP13.33□□□□□ -0.28
CHD3-206ENST00000452447 TACR2P21452 398 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 PMLP29590 882 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 CCR1P32246 355 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 CLCN1P35523 988 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 CSKP41240 450 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 ZBTB16Q05516 673 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 ZNF252P-AS1Q0IIN9 211 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
CHD3-206ENST00000452447 FSCBQ5H9T9 825 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 MIIPQ5JXC2 388 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 DCAF12L1Q5VU92 463 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 FAM183BPQ6ZVS7 135 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 FAM71AQ8IYT1 594 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 MINDY1Q8N5J2 469 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 DEFB124Q8NES8 71 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 DNASE2BQ8WZ79 361 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 TTC17Q96AE7 1141 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
CHD3-206ENST00000452447 SAMSN1Q9NSI8 373 aaKnown RBP13.33□□□□□ -0.28
CHD3-206ENST00000452447 A0A1B0GTW7 788 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 ERBB2P04626 1255 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 EEF1GP26641 437 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 NME3Q13232 169 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 MTA1Q13330 715 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 DRAP1Q14919 205 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 PITRM1Q5JRX3 1037 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 RABGAP1LQ5R372 815 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 RNF219Q5W0B1 726 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 ZNF776Q68DI1 518 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 CLEC17AQ6ZS10 378 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 ZDHHC17Q8IUH5 632 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 SLC2A13Q96QE2 648 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 PCED1AQ9H1Q7 454 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 PLCB1Q9NQ66 1216 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 LMBRD1Q9NUN5 540 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 INTS6Q9UL03 887 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 SRPRAP08240 638 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 NNMTP40261 264 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 RPS14P62263 151 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 ECT2LQ008S8 904 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 SLC6A3Q01959 620 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 KCNMA1Q12791 1236 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 SEMA3BQ13214 749 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 EIF4EBP2Q13542 120 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 HNRNPA1L2Q32P51 320 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 PTPN20Q4JDL3 420 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 KLHDC7AQ5VTJ3 777 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 TTC39BQ5VTQ0 682 aaPredicted RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 OLFML1Q6UWY5 402 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 ZCCHC9Q8N567 271 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 KDM1BQ8NB78 822 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 TMEM35BQ8NCS4 154 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 SNX19Q92543 992 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 GBP4Q96PP9 640 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 ZDHHC5Q9C0B5 715 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 BTBD1Q9H0C5 482 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 EIF2B4Q9UI10 523 aaKnown RBP13.32□□□□□ -0.28
CHD3-206ENST00000452447 NCKAP1Q9Y2A7 1128 aa13.32□□□□□ -0.28
CHD3-206ENST00000452447 A0A1B0GVM2 712 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 TCAF2A6NFQ2 919 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 UPK3BL1B0FP48 263 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 UPK3BL2E5RIL1 263 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 M0QYT0 321 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 BCAT2O15382 392 aaPredicted RBP13.31□□□□□ -0.28
CHD3-206ENST00000452447 SIN3BO75182 1162 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 TPM2P07951 284 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 UCHL3P15374 230 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 CYP11B1P15538 503 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 ACSL1P33121 698 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 NOS2P35228 1153 aa13.31□□□□□ -0.28
CHD3-206ENST00000452447 OXCT1P55809 520 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms