RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 ACAD10Q6JQN1 1059 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 CXorf57Q6NSI4 855 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 CHST9Q7L1S5 443 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 METTL3Q86U44 580 aaKnown RBP16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 MCOLN2Q8IZK6 566 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 AHI1Q8N157 1196 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 EMC1Q8N766 993 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 MSANTD4Q8NCY6 345 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 OR52K2Q8NGK3 314 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 MRGPRX1Q96LB2 322 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 TPSD1Q9BZJ3 242 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 TKTL2Q9H0I9 626 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 TMPRSS4Q9NRS4 437 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 STIM2Q9P246 746 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 ZNF212Q9UDV6 495 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 SLC12A6Q9UHW9 1150 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 STAP1Q9ULZ2 295 aa16.65■□□□□ 0.26
SCAMP4-205ENST00000452128 IGLV3-10A0A075B6K4 115 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 SYNJ2BP-COX16A0A087WUM0 186 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 DDX3XO00571 662 aaKnown RBP eCLIP16.64■□□□□ 0.257e-10■■■□□ 17.7
SCAMP4-205ENST00000452128 ALDH1A2O94788 518 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 CCDC172P0C7W6 258 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 PTPN9P43378 593 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 SULT1E1P49888 294 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 COPAP53621 1224 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 DEUP1Q05D60 604 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 CAMK2GQ13555 558 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 ARID5BQ14865 1188 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 USP39Q53GS9 565 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 PLA2G2CQ5R387 149 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 WDR59Q6PJI9 974 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 CHSY1Q86X52 802 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 MFN1Q8IWA4 741 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 ZNF557Q8N988 423 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 C3orf20Q8ND61 904 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 CYB5D2Q8WUJ1 264 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 UCMAQ8WVF2 138 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 HMGB4Q8WW32 186 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 RLN3Q8WXF3 142 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 SYN2Q92777 582 aaPredicted RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 VCPIP1Q96JH7 1222 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 HAPLN3Q96S86 360 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 MKRN2Q9H000 416 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 HAUS4Q9H6D7 363 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 WDCPQ9H6R7 721 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 METTL5Q9NRN9 209 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 COX16Q9P0S2 106 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 INVSQ9Y283 1065 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 TBC1D30Q9Y2I9 924 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 SNX10Q9Y5X0 201 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 GON4LQ3T8J9 2241 aa16.64■□□□□ 0.25
SCAMP4-205ENST00000452128 F5H5T6 163 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 LRP3O75074 770 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 EPN2O95208 641 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CALB1P05937 261 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 PDGFRAP16234 1089 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CSKP41240 450 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 NSFP46459 744 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 PMS2CLQ68D20 193 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 SDE2Q6IQ49 451 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 PRR23BQ6ZRT6 265 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CEP68Q76N32 757 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CIR1Q86X95 450 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 APCDD1Q8J025 514 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 KDM1BQ8NB78 822 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 RNF34Q969K3 372 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 NUP58Q9BVL2 599 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CIPCQ9C0C6 399 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 SLC6A17Q9H1V8 727 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 KIAA1522Q9P206 1035 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 CAPN11Q9UMQ6 739 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 SPAG17Q6Q759 2223 aa16.63■□□□□ 0.25
SCAMP4-205ENST00000452128 A0A1B0GVM2 712 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 TCAF2A6NFQ2 919 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 CNTN5O94779 1100 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 IGLV3-19P01714 112 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 KRT3P12035 628 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 GZMAP12544 262 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 MZF1P28698 734 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 RDXP35241 583 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 GGCXP38435 758 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 VASPP50552 380 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 HDAC4P56524 1084 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 E2F5Q15329 346 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 C15orf59Q2T9L4 293 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 PLEKHG6Q3KR16 790 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 ALFQ53S48 1182 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 PITRM1Q5JRX3 1037 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 MANEALQ5VSG8 457 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 TTC39BQ5VTQ0 682 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 SFMBT2Q5VUG0 894 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 PLEKHA7Q6IQ23 1121 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 STRADAQ7RTN6 431 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 CARNMT1Q8N4J0 409 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 MAGEB5Q9BZ81 275 aa16.62■□□□□ 0.25
SCAMP4-205ENST00000452128 IFNKQ9P0W0 207 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms