RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PAEPP09466 180 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HIST1H2AGP0C0S8 130 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HIST1H2ADP20671 130 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TMEFF1Q8IYR6 380 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYCBPAPQ8TBZ2 947 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HCAR2Q8TDS4 363 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CAPSLQ8WWF8 208 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MRRFQ96E11 262 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HIST1H2AHQ96KK5 128 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HIST1H2AJQ99878 128 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 H2AFJQ9BTM1 129 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 FZD8Q9H461 694 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYH7BA7E2Y1 1941 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SFTPCP11686 197 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MSH3P20585 1137 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MASP1P48740 699 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 GTF2BQ00403 316 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 DUOXA1Q1HG43 343 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZCCHC8Q6NZY4 707 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 RTL10Q7L3V2 364 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 EXD1Q8NHP7 514 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 DEPDC7Q96QD5 511 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 F5P12259 2224 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CCDC130P13994 396 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PTPN3P26045 913 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 AVPR2P30518 371 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CAPZA2P47755 286 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 BASP1P80723 227 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PCSK7Q16549 785 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZDHHC17Q8IUH5 632 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 FBXL16Q8N461 479 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 C1orf131Q8NDD1 294 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 KIF18AQ8NI77 898 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 POPDC2Q9HBU9 364 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 OSGEPQ9NPF4 335 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CEP72Q9P209 647 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADAMTS1Q9UHI8 967 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 BACE2Q9Y5Z0 518 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 NVLO15381 856 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SERPING1P05155 500 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADCY8P40145 1251 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TUBP50607 506 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZBED6P86452 979 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CDK18Q07002 472 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TAF11Q15544 211 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ATP13A4Q4VNC1 1196 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TXNDC8Q6A555 127 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PTRHD1Q6GMV3 140 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SHQ1Q6PI26 577 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TFAP2DQ7Z6R9 452 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PIGZQ86VD9 579 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 FAM131BQ86XD5 332 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TXNDC5Q8NBS9 432 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SPPL3Q8TCT6 385 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 RAPGEF5Q92565 580 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ULK4Q96C45 1275 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 GDAP1L1Q96MZ0 367 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ADGRE3Q9BY15 652 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF518BQ9C0D4 1074 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 KLC2Q9H0B6 622 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 IL25Q9H293 177 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PHPT1Q9NRX4 125 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 AGPAT4Q9NRZ5 378 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 DNAJB4Q9UDY4 337 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 H2AFYO75367 372 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TJP3O95049 919 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SKILP12757 684 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ATF2P15336 505 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CORO1AP31146 461 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 GARSP41250 739 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CASP4P49662 377 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 GHRHRQ02643 423 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MCL1Q07820 350 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PDK1Q15118 436 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 LONRF1Q17RB8 773 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 HDAC7Q8WUI4 952 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 UBXN4Q92575 508 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 RERGQ96A58 199 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 DPYSL5Q9BPU6 564 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 LATS2Q9NRM7 1088 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZSCAN32Q9NX65 697 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 UBA2Q9UBT2 640 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 PKD1L3Q7Z443 1732 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TRUB2O95900 331 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 CPP00450 1065 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 IFNA16P05015 189 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 TIGD7Q6NT04 549 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 SLFN11Q7Z7L1 901 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZNF280BQ86YH2 543 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 DHX40Q8IX18 779 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ELOA2Q8IYF1 753 aaPredicted RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 ZCCHC9Q8N567 271 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 INTS7Q9NVH2 962 aaKnown RBP5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 POU2F3Q9UKI9 436 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 VANGL2Q9ULK5 521 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 WNT6Q9Y6F9 365 aa5.78□□□□□ -1.48
CDC42BPA-209ENST00000448940 MYH11P35749 1972 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 COL18A1P39060 1754 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 IGLV3-22A0A075B6J6 115 aa5.77□□□□□ -1.49
CDC42BPA-209ENST00000448940 ZNF248Q8NDW4 579 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms