RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 NAA20P61599 178 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 PCSK7Q16549 785 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 USP41Q3LFD5 358 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 TMEM17Q86X19 198 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 BRSK2Q8IWQ3 736 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SLC38A7Q9NVC3 462 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 FBXO9Q9UK97 447 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 GAPVD1Q14C86 1478 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 L7N2F9 121 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 EEF2KO00418 725 aaKnown RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 MMP1P03956 469 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 GNAO1P09471 354 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 IRAK1P51617 712 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 EFNA5P52803 228 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 VAMP2P63027 116 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 RASGEF1BQ0VAM2 473 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 FRG1Q14331 258 aaKnown RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 C2orf76Q3KRA6 126 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SFRP1Q8N474 314 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 OTUB2Q96DC9 234 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 MAGEB10Q96LZ2 347 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 AIFM3Q96NN9 605 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 LBHD1Q9BQE6 289 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 CDADC1Q9BWV3 514 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SNX12Q9UMY4 172 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 PCDHGB5Q9Y5G0 923 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 KANTRA0A1W2PQU2 76 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 PRRG1O14668 218 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 UBDO15205 165 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 UGT2B11O75310 529 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 CYP2A7P20853 494 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 F8A1P23610 371 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 PSMA1P25786 263 aaKnown RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 GCKRQ14397 625 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SQLEQ14534 574 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 FRMD5Q7Z6J6 570 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 RASAL3Q86YV0 1011 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SEPHS2Q99611 448 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 DBNDD2Q9BQY9 259 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 ACTR8Q9H981 624 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 DBR1Q9UK59 544 aaKnown RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 MAP3K19Q56UN5 1328 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 POLR3AO14802 1390 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 A0A1W2PQC6 194 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 SGTAO43765 313 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 CSH1P0DML2 217 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 CSH2P0DML3 217 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 AGKQ53H12 422 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 TMPRSS11AQ6ZMR5 421 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 RNF44Q7L0R7 432 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 KDELC2Q7Z4H8 507 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 FAM126BQ8IXS8 530 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 OR4C6Q8NH72 309 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 RNF145Q96MT1 663 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 TUBGCP5Q96RT8 1024 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 FAM49AQ9H0Q0 323 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 BHMT2Q9H2M3 363 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 RBAKQ9NYW8 714 aaPredicted RBP9.11□□□□□ -0.95
NIPBL-202ENST00000448238 GPRC5DQ9NZD1 345 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 WHRNQ9P202 907 aa9.11□□□□□ -0.95
NIPBL-202ENST00000448238 BHMG1C9JSJ3 638 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 MED24O75448 989 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ALDH9A1P49189 494 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IL18Q14116 193 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 HIPK1Q86Z02 1210 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PHF10Q8WUB8 498 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ZNF512Q96ME7 567 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TRNT1Q96Q11 434 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 EHD4Q9H223 541 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 MCIDASD6RGH6 385 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ME2P23368 584 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 BEND5Q7L4P6 421 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GALNTL5Q7Z4T8 443 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 ELOA2Q8IYF1 753 aaPredicted RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GDPD5Q8WTR4 605 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 KCNS3Q9BQ31 491 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PHTF1Q9UMS5 762 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 MROH7-TTC4A0A0A0MT08 1334 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 FLT1P17948 1338 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 KAT7O95251 611 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CCNE2O96020 404 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IFNA2P01563 188 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 HMGCRP04035 888 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IFNA4P05014 189 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GCLMP48507 274 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 STXBP1P61764 594 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 CARD16Q5EG05 197 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PIK3R6Q5UE93 754 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 DEFB107AQ8IZN7 70 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TSPYL6Q8N831 410 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TCF7L2Q9NQB0 619 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 TMEM51Q9NW97 253 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 HAO1Q9UJM8 370 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 IKZF3Q9UKT9 509 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 PSMD13Q9UNM6 376 aa9.1□□□□□ -0.95
NIPBL-202ENST00000448238 GNEQ9Y223 722 aaKnown RBP9.1□□□□□ -0.95
NIPBL-202ENST00000448238 AK5Q9Y6K8 562 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms