RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 RAD54BQ9Y620 910 aa4.63□□□□□ -1.67
VPS29-202ENST00000447578 LRPPRCP42704 1394 aaKnown RBP4.63□□□□□ -1.67
VPS29-202ENST00000447578 ADGRL1O94910 1474 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 ATP7AQ04656 1500 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 H0Y3Z8 333 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 DCLK1O15075 740 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 KRT38O76015 456 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 NXPH3O95157 252 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TOP3BO95985 862 aaKnown RBP4.62□□□□□ -1.67
VPS29-202ENST00000447578 ANXA6P08133 673 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 ATXN1LP0C7T5 689 aaKnown RBP4.62□□□□□ -1.67
VPS29-202ENST00000447578 LRPAP1P30533 357 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 CYP2C18P33260 490 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 LIFRP42702 1097 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 CLCN2P51788 898 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 LILRA4P59901 499 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 RPS6KA2Q15349 733 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TOMM20Q15388 145 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 MANEALQ5VSG8 457 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 CCDC30Q5VVM6 783 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 RINT1Q6NUQ1 792 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 MAVSQ7Z434 540 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TECPR1Q7Z6L1 1165 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TTC30AQ86WT1 665 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.62□□□□□ -1.67
VPS29-202ENST00000447578 BPIFB1Q8TDL5 484 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 UBE2Q2Q8WVN8 375 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TBC1D5Q92609 795 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 GOLGA1Q92805 767 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 C3orf49Q96BT1 292 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 ZBTB10Q96DT7 871 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 RRP36Q96EU6 259 aaKnown RBP4.62□□□□□ -1.67
VPS29-202ENST00000447578 FAM227BQ96M60 508 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 MACROD1Q9BQ69 325 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 SLC25A32Q9H2D1 315 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TBC1D22BQ9NU19 505 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 ELOVL5Q9NYP7 299 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 DNMT3BQ9UBC3 853 aaKnown RBP4.62□□□□□ -1.67
VPS29-202ENST00000447578 CDY1Q9Y6F8 540 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 PARD3Q8TEW0 1356 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 PTPRTO14522 1441 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 TRPM2O94759 1503 aa4.62□□□□□ -1.67
VPS29-202ENST00000447578 LAMC1P11047 1609 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 PNMA6EA0A0J9YXQ4 647 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 CCDC196A0A1B0GTZ2 297 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 KCNU1A8MYU2 1149 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 QSOX1O00391 747 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TCERG1O14776 1098 aaKnown RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 PPEF2O14830 753 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ZSCAN9O15535 394 aaPredicted RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 FIBPO43427 364 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ZNF500O60304 480 aaPredicted RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 NTN1O95631 604 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TUBB4AP04350 444 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 KLRK1P26718 216 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 MST1P26927 711 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 AKT1P31749 480 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ARHGAP25P42331 645 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 PXNP49023 591 aaPredicted RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 PRKAG1P54619 331 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 NR1H2P55055 460 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 EEFSECP57772 596 aaKnown RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 VAMP2P63027 116 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 CHRNDQ07001 517 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 FHL1Q13642 323 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 AARS2Q5JTZ9 985 aaKnown RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 PCID2Q5JVF3 399 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TREML2Q5T2D2 321 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ZNF618Q5T7W0 954 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ANKRD16Q6P6B7 361 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TMEM108Q6UXF1 575 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 NAPRTQ6XQN6 538 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 DSTYKQ6XUX3 929 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 SPARTQ8N0X7 666 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TCP11L2Q8N4U5 519 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TMEM57Q8N5G2 664 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 TSPYL6Q8N831 410 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ABHD5Q8WTS1 349 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 UCMAQ8WVF2 138 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 WDR60Q8WVS4 1066 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 WASF1Q92558 559 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ELAC1Q9H777 363 aaKnown RBP4.61□□□□□ -1.67
VPS29-202ENST00000447578 CHODLQ9H9P2 273 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 PLEKHA5Q9HAU0 1116 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 NOD2Q9HC29 1040 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 PREBQ9HCU5 417 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 POLG2Q9UHN1 485 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 DAPP1Q9UN19 280 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 ABCA9Q8IUA7 1624 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 E9PCH4 1651 aa4.61□□□□□ -1.67
VPS29-202ENST00000447578 KAT6BQ8WYB5 2073 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 SMIM35A0A1B0GVV1 85 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 A6NCN8 305 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 E7EVH7 732 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 J3KTA2 159 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 K7ENM7 598 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 PCDH17O14917 1159 aa4.6□□□□□ -1.67
VPS29-202ENST00000447578 DDX58O95786 925 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms