RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 ATP2A3Q93084 1043 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 NXPE3Q969Y0 559 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 TBC1D31Q96DN5 1066 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 TMA16Q96EY4 203 aaKnown RBP18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 BRD9Q9H8M2 597 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 NEU3Q9UQ49 428 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 JRKLQ9Y4A0 524 aa18.56■□□□□ 0.56
TRAPPC4-203ENST00000447216 CHD5Q8TDI0 1954 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 OTOL1A6NHN0 477 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 H3BRJ5 948 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 FANCGO15287 622 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 NARSO43776 548 aaKnown RBP18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 NFATC1O95644 943 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 ARL4AP40617 200 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 PDK2Q15119 407 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 ANO4Q32M45 955 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 ALFQ53S48 1182 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 RABGAP1LQ5R372 815 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 SYT10Q6XYQ8 523 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 SPOCD1Q6ZMY3 1216 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 CCDC50Q8IVM0 306 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 HJURPQ8NCD3 748 aaPredicted RBP18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 EXD1Q8NHP7 514 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 DDI1Q8WTU0 396 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 CSPG4P5Q96PW8 444 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 ECT2Q9H8V3 914 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 GTSE1Q9NYZ3 720 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 DNAI1Q9UI46 699 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 KIAA1549LQ6ZVL6 1849 aa18.55■□□□□ 0.56
TRAPPC4-203ENST00000447216 IGLV3-10A0A075B6K4 115 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 C19orf67A6NJJ6 358 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 DRGXA6NNA5 263 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 NEDD8-MDP1E9PL57 170 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ARNTLO00327 626 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 KCNK3O14649 394 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 DAPK3O43293 454 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 PYGMP11217 842 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ADH5P11766 374 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 AMPD1P23109 780 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 IL4RP24394 825 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 EPHB2P29323 1055 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ETF1P62495 437 aaKnown RBP18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 RUNX3Q13761 415 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 C5orf22Q49AR2 442 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 MPPE1Q53F39 396 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ACBD5Q5T8D3 534 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 FYB2Q5VWT5 728 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 RFX8Q6ZV50 586 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 TFAP2DQ7Z6R9 452 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 MAP7D3Q8IWC1 876 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 RCOR2Q8IZ40 523 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 RBM41Q96IZ5 413 aaKnown RBP18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 BBS2Q9BXC9 721 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 MFHAS1Q9Y4C4 1052 aa18.54■□□□□ 0.56
TRAPPC4-203ENST00000447216 ADH1CP00326 375 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 CYBBP04839 570 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 KRT10P13645 584 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 TYRP14679 529 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 HOXD9P28356 352 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 HOXC13P31276 330 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 CXCR5P32302 372 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 CDKN2BP42772 138 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 DPYSQ14117 519 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ANKRD20A8PQ5CZ79 823 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 KAZNQ674X7 775 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 CPA6Q8N4T0 437 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 NAT16Q8N8M0 369 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 PCDH19Q8TAB3 1148 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 NAPGQ99747 312 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ZNF670Q9BS34 389 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 HERPUD2Q9BSE4 406 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ZYG11BQ9C0D3 744 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ARHGEF4Q9NR80 690 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ETNK2Q9NVF9 386 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 MARK1Q9P0L2 795 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 NYNRINQ9P2P1 1898 aaKnown RBP18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 PPARGC1AQ9UBK2 798 aaKnown RBP18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 CLEC4EQ9ULY5 219 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 ATG2BQ96BY7 2078 aa18.53■□□□□ 0.56
TRAPPC4-203ENST00000447216 TYW5A2RUC4 315 aaKnown RBP18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 PENKP01210 267 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 ERCC2P18074 760 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 SOX9P48436 509 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 TDGQ13569 410 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 GAB4Q2WGN9 574 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 ITPRIPL2Q3MIP1 535 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 RFX6Q8HWS3 928 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 CARNMT1Q8N4J0 409 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 NETO2Q8NC67 525 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 WFDC5Q8TCV5 224 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 CSGALNACT1Q8TDX6 532 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 FAF2Q96CS3 445 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 NECAB3Q96P71 396 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 HEMGNQ9BXL5 484 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 NDFIP2Q9NV92 336 aa18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 RCOR3Q9P2K3 495 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC4-203ENST00000447216 F5P12259 2224 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 hCG_1818297A0A087WSY0 165 aa18.51■□□□□ 0.55
TRAPPC4-203ENST00000447216 A0A1B0GVM2 712 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms