RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 KDM4FA0A1W2PPD8 638 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 FAM220BPB1ANY3 271 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 IRF6O14896 467 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SYN3O14994 580 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 EOMESO95936 686 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 RRP1BQ14684 758 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CXCL17Q6UXB2 119 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SLC24A5Q71RS6 500 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 AADATQ8N5Z0 425 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PRMT1Q99873 361 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 NPHS2Q9NP85 383 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 GPN3Q9UHW5 284 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 AKAP12Q02952 1782 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SPEF2Q9C093 1822 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 RFC2P35250 354 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 C1DQ13901 141 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SMIM5Q71RC9 77 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 KRT73Q86Y46 540 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 TC2NQ8N9U0 490 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 AVL9Q8NBF6 648 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 USP7Q93009 1102 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 NSL1Q96IY1 281 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PPP1R10Q96QC0 940 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 ASTN2O75129 1339 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 RBM47A0AV96 593 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 LYPLA2O95372 231 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 ENO1P06733 434 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 ITGA7Q13683 1181 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CHI3L2Q15782 390 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PSMD5Q16401 504 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PARP6Q2NL67 630 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 USP39Q53GS9 565 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CEP68Q76N32 757 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 GAD1Q99259 594 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CHORDC1Q9UHD1 332 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SIGLEC16A6NMB1 481 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 AVILO75366 819 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 AMD1P17707 334 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 GTF2BQ00403 316 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CAMKK1Q8N5S9 505 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 RERGQ96A58 199 aaPredicted RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 ZFYVE19Q96K21 471 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 TTPALQ9BTX7 342 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 TLE6Q9H808 572 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CATSPERZQ9NTU4 200 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 MEI4A8MW99 385 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 DNTTP04053 509 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 YBX3P16989 372 aaKnown RBP eCLIP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CENPAP49450 140 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SERPINH1P50454 418 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CASP7P55210 303 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 RGS1Q08116 209 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 BBS4Q96RK4 519 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 TMEM216Q9P0N5 145 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 MRPS33Q9Y291 106 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PCDHB9Q9Y5E1 797 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PTENP60484 403 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PTPN21Q16825 1174 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 MON1AQ86VX9 555 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 ANKRD52Q8NB46 1076 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 COMMD8Q9NX08 183 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CCDC85CA6NKD9 419 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CXCL14O95715 111 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 PFKMP08237 780 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 GLUD2P49448 558 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 GPR15P49685 360 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 MRPS15P82914 257 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 TUSC3Q13454 348 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 INTS11Q5TA45 600 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 DEPDC1Q5TB30 811 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 MROH9Q5TGP6 573 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SERPINA13PQ6UXR4 307 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 SLC2A14Q8TDB8 520 aa8.72□□□□□ -1.01
PTPN3-204ENST00000446349 HNRNPLLQ8WVV9 542 aaKnown RBP8.72□□□□□ -1.01
PTPN3-204ENST00000446349 CLTBP09497 229 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 AKAP5P24588 427 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 NTSP30990 170 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PLOD1Q02809 727 aaPredicted RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 ELP6Q0PNE2 266 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 MRPL28Q13084 256 aaKnown RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 KYNUQ16719 465 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 EIF1ADQ8N9N8 165 aaKnown RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 LPCAT1Q8NF37 534 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 HASPINQ8TF76 798 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 CXorf40BQ96DE9 158 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 KLRG1Q96E93 195 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 C19orf60Q96EN9 201 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 C9orf72Q96LT7 481 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 MAGEB18Q96M61 343 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 MLPHQ9BV36 600 aaPredicted RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PAPOLBQ9NRJ5 636 aaKnown RBP8.71□□□□□ -1.01
PTPN3-204ENST00000446349 SNX6Q9UNH7 406 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PCDHA11Q9Y5I1 949 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 APOC4-APOC2K7ER74 178 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 APOC2P02655 101 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PKN1Q16512 942 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 COLGALT2Q8IYK4 626 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 B3GALNT2Q8NCR0 500 aa8.71□□□□□ -1.01
PTPN3-204ENST00000446349 PDLIM2Q96JY6 352 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms