RNA–Protein interactions for RNA: ENST00000445692.5

APLF-203, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 3,906 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-203ENST00000445692 GPR107Q5VW38 600 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 FRMD7Q6ZUT3 714 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 TMC7Q7Z402 723 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 TDRPQ86YL5 185 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 UPF1Q92900 1129 aaKnown RBP eCLIP12.35□□□□□ -0.43
APLF-203ENST00000445692 SPATA17Q96L03 361 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 CCDC68Q9H2F9 335 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 ADGRA2Q96PE1 1338 aa12.35□□□□□ -0.43
APLF-203ENST00000445692 EEF2KO00418 725 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 SRP72O76094 671 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 PGK2P07205 417 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 NFICP08651 508 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 TFPTP0C1Z6 253 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 GRK2P25098 689 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 NAMPTP43490 491 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 CCR10P46092 362 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 NAA20P61599 178 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 LY6KQ17RY6 165 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 DPY19L2P1Q6NXN4 242 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 CCDC81Q6ZN84 652 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 SAPCD2Q86UD0 394 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 NAT8LQ8N9F0 302 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 DDHD1Q8NEL9 900 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 ZNF541Q9H0D2 1346 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 TIPRLO75663 272 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 PIK3R1P27986 724 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 OCA2Q04671 838 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 C6orf10Q5SRN2 563 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 FAM47BQ8NA70 645 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 CASP10Q92851 521 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 EBNA1BP2Q99848 306 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 LSM8O95777 96 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 GFAPP14136 432 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 GRIA3P42263 894 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 BAG6P46379 1132 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 ITGADQ13349 1161 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 KLF1Q13351 362 aaPredicted RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 TRIM16LQ309B1 348 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 TBCELQ5QJ74 424 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 GK5Q6ZS86 529 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 VPS39Q96JC1 886 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 SYT11Q9BT88 431 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 NMRAL1Q9HBL8 299 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 ADAMTS6Q9UKP5 1117 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 MYO18AQ92614 2054 aaKnown RBP12.34□□□□□ -0.43
APLF-203ENST00000445692 BTAF1O14981 1849 aa12.34□□□□□ -0.43
APLF-203ENST00000445692 SMAPO00193 183 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 INPP4BO15327 924 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 METTL18O95568 372 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 CHRNGP07510 517 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 STAG3L1P0CL83 205 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 ACAT1P24752 427 aaKnown RBP12.33□□□□□ -0.43
APLF-203ENST00000445692 GP5P40197 560 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 EIF2B2P49770 351 aaKnown RBP12.33□□□□□ -0.43
APLF-203ENST00000445692 EFNA5P52803 228 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 LSM3P62310 102 aaKnown RBP12.33□□□□□ -0.43
APLF-203ENST00000445692 KCTD2Q14681 263 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 CA9Q16790 459 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 TATDN1Q6P1N9 297 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 DDI1Q8WTU0 396 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 HTR3CQ8WXA8 447 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 LPIN3Q9BQK8 851 aa12.33□□□□□ -0.43
APLF-203ENST00000445692 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.33□□□□□ -0.43
APLF-203ENST00000445692 LINC00854A0A1B0GVQ3 168 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SMIM31A0A1B0GVY4 71 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 GOT1P17174 413 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 XRCC1P18887 633 aaPredicted RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 EIF4BP23588 611 aaKnown RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 FAM83EQ2M2I3 478 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 ANGEL2Q5VTE6 544 aaKnown RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 OR52E8Q6IFG1 317 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 BRSK2Q8IWQ3 736 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 KCTD4Q8WVF5 259 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SLCO2A1Q92959 643 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 NRBF2Q96F24 287 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 TEX13BQ9BXU2 312 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 NOL11Q9H8H0 719 aaKnown RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 HMGXB4Q9UGU5 601 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SPDYE2BA6NHP3 402 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 NCF1BA6NI72 391 aaPredicted RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 NCF1CA8MVU1 366 aaPredicted RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 SPDYE6P0CI01 402 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 NCF1P14598 390 aaPredicted RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 CKMT2P17540 419 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 GCAP28676 217 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 LAMTOR4Q0VGL1 99 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SLC9B1Q4ZJI4 515 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 FBXO48Q5FWF7 155 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 DCAF15Q66K64 600 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 PACS1Q6VY07 963 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 PATL1Q86TB9 770 aaKnown RBP12.33□□□□□ -0.44
APLF-203ENST00000445692 PYROXD2Q8N2H3 581 aa12.33□□□□□ -0.44
APLF-203ENST00000445692 SLC35B2Q8TB61 432 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms