RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 AMFRQ9UKV5 643 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 FZD10Q9ULW2 581 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 PACSIN2Q9UNF0 486 aaPredicted RBP17.8■□□□□ 0.44
LIME1-202ENST00000444951 AP4E1Q9UPM8 1137 aa17.8■□□□□ 0.44
LIME1-202ENST00000444951 KIF5CO60282 957 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 SRGAP2O75044 1071 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 RARAP10276 462 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 CA9Q16790 459 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 MS4A13Q5J8X5 152 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 PIK3R6Q5UE93 754 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 NADSYN1Q6IA69 706 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 Q6ZNB5 142 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 TTC8Q8TAM2 541 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 DEPDC1BQ8WUY9 529 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 IRF7Q92985 503 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 BHMTQ93088 406 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 NELL2Q99435 816 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 HINFPQ9BQA5 517 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.79■□□□□ 0.44
LIME1-202ENST00000444951 OBP2AQ9NY56 170 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 ZNF510Q9Y2H8 683 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 HS3ST4Q9Y661 456 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 PIAS3Q9Y6X2 628 aa17.79■□□□□ 0.44
LIME1-202ENST00000444951 SLC9A3R1O14745 358 aaPredicted RBP17.78■□□□□ 0.44
LIME1-202ENST00000444951 TDGF1P13385 188 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 ARSAP15289 507 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TCF3P15923 654 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TACR2P21452 398 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 SLC6A4P31645 630 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 SOX9P48436 509 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 MARCKSL1P49006 195 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 PPP6R3Q5H9R7 873 aaPredicted RBP17.78■□□□□ 0.44
LIME1-202ENST00000444951 ADGRF1Q5T601 910 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TPGS1Q6ZTW0 290 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 CYP4V2Q6ZWL3 525 aaPredicted RBP17.78■□□□□ 0.44
LIME1-202ENST00000444951 C14orf80Q86SX3 495 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 NT5DC3Q86UY8 548 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 RHOT1Q8IXI2 618 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 LGI2Q8N0V4 545 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 ZBTB44Q8NCP5 570 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TRIM58Q8NG06 486 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 OSCP1Q8WVF1 389 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 RUBCNQ92622 972 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 NTAN1Q96AB6 310 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 HAPLN3Q96S86 360 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 CHRDQ9H2X0 955 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 EBF3Q9H4W6 596 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TRPV5Q9NQA5 729 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TMEM51Q9NW97 253 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 TBC1D14Q9P2M4 693 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 VANGL2Q9ULK5 521 aa17.78■□□□□ 0.44
LIME1-202ENST00000444951 MRPS17Q9Y2R5 130 aaKnown RBP17.78■□□□□ 0.44
LIME1-202ENST00000444951 KIF26AQ9ULI4 1882 aaPredicted RBP17.78■□□□□ 0.44
LIME1-202ENST00000444951 FAM72CH0Y354 149 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 CREB3O43889 395 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 LILRB5O75023 590 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KRT1P04264 644 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KRT7P08729 469 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 TNK2Q07912 1038 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 AUHQ13825 339 aaKnown RBP17.77■□□□□ 0.44
LIME1-202ENST00000444951 GAS6Q14393 721 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KRT81Q14533 505 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 BOLA3Q53S33 107 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 ODF2Q5BJF6 829 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 FAM133BQ5BKY9 247 aaKnown RBP17.77■□□□□ 0.44
LIME1-202ENST00000444951 FAM72AQ5TYM5 149 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 FAM72DQ6L9T8 149 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 FAM72BQ86X60 149 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 SLC35F6Q8N357 371 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KCTD6Q8NC69 237 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 FAM3CQ92520 227 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KRT35Q92764 455 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 KCTD15Q96SI1 283 aaPredicted RBP17.77■□□□□ 0.44
LIME1-202ENST00000444951 DDX50Q9BQ39 737 aaKnown RBP17.77■□□□□ 0.44
LIME1-202ENST00000444951 LMAN1LQ9HAT1 526 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 ZSCAN32Q9NX65 697 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 OR12D3Q9UGF7 316 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 PCDHGA2Q9Y5H1 932 aa17.77■□□□□ 0.44
LIME1-202ENST00000444951 F5H5T6 163 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 MAN2B1O00754 1011 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 NCAM2O15394 837 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 LATS1O95835 1130 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 AIF1P55008 147 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 MLLT6P55198 1093 aaPredicted RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 CDH6P55285 790 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 GNG11P61952 73 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 SCAPQ12770 1279 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 ANO4Q32M45 955 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 RWDD4Q6NW29 188 aaKnown RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 CIR1Q86X95 450 aaPredicted RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 CFAP52Q8N1V2 620 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 TEKT4Q8WW24 435 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 AZIN2Q96A70 460 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 MYEOVQ96EZ4 313 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 RPRD1AQ96P16 312 aaPredicted RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 RBM12Q9NTZ6 932 aaKnown RBP17.76■□□□□ 0.43
LIME1-202ENST00000444951 PLK2Q9NYY3 685 aa17.76■□□□□ 0.43
LIME1-202ENST00000444951 STIM2Q9P246 746 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms