RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 SPATA21Q7Z572 469 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 DCP1BQ8IZD4 617 aaKnown RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 GRAMD1AQ96CP6 724 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 STAMBPL1Q96FJ0 436 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TRIM56Q9BRZ2 755 aaKnown RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 BRD8Q9H0E9 1235 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 DNAJB4Q9UDY4 337 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 ZNF180Q9UJW8 692 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 GRID1Q9ULK0 1009 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TNFRSF10BO14763 440 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 LPXNO60711 386 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 FAM155BO75949 473 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 IGLV3-25P01717 112 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 PTPN3P26045 913 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 CYP2C18P33260 490 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SESN2P58004 480 aaPredicted RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 DNAJC3Q13217 504 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 TRMT10BQ6PF06 316 aaKnown RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 RGS9BPQ6ZS82 235 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 ABI1Q8IZP0 508 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 HDAC11Q96DB2 347 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SERAC1Q96JX3 654 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SIK2Q9H0K1 926 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 ZCWPW1Q9H0M4 648 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 OSBPL2Q9H1P3 480 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 ACTR5Q9H9F9 607 aaPredicted RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 SMYD2Q9NRG4 433 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 PIH1D1Q9NWS0 290 aaKnown RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 TMEM161AQ9NX61 479 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 WDR27A2RRH5 827 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 TRIM49D1C9J1S8 452 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 IRAK2O43187 625 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 MTSS1O43312 755 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 FSBPO95073 299 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SNRPAP09012 282 aaKnown RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 SRGAP2BP0DMP2 458 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 PYGBP11216 843 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SELPP16109 830 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 ADRA1DP25100 572 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 NFE2Q16621 373 aaPredicted RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 RWDD4Q6NW29 188 aaKnown RBP14.05□□□□□ -0.16
RBM39-216ENST00000444878 TRPM8Q7Z2W7 1104 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 SFMBT1Q9UHJ3 866 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 ARL2BPQ9Y2Y0 163 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 CAPN7Q9Y6W3 813 aa14.05□□□□□ -0.16
RBM39-216ENST00000444878 FAM159BA6NKW6 160 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 H0YHG0 523 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 MGAT1P26572 445 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 CCR1P32246 355 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 GRK4P32298 578 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 GARSP41250 739 aaKnown RBP14.04□□□□□ -0.16
RBM39-216ENST00000444878 CRADDP78560 199 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 SLC18A2Q05940 514 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 GALNT2Q10471 571 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
RBM39-216ENST00000444878 BRMS1LQ5PSV4 323 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 CCNJLQ8IV13 435 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 DEPDC1BQ8WUY9 529 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 APOPT1Q96IL0 206 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 AGAP3Q96P47 875 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 SMOC2Q9H3U7 446 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 ARHGEF38Q9NXL2 777 aa14.04□□□□□ -0.16
RBM39-216ENST00000444878 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 KRT38O76015 456 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 CSH1P0DML2 217 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 CSH2P0DML3 217 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 COL6A1P12109 1028 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 ACTN3Q08043 901 aaPredicted RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 EIF4EBP2Q13542 120 aaPredicted RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 SPRED3Q2MJR0 410 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 CYS1Q717R9 158 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 CASP10Q92851 521 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 FUBP3Q96I24 572 aaKnown RBP eCLIP14.03□□□□□ -0.166e-6■■□□□ 13.2
RBM39-216ENST00000444878 HAPLN3Q96S86 360 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 NAT9Q9BTE0 207 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 KLHL14Q9P2G3 628 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 SLC17A7Q9P2U7 560 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 PHTF1Q9UMS5 762 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 PHF24Q9UPV7 400 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 PCDHB7Q9Y5E2 793 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 WDR91A4D1P6 747 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 DNM1LO00429 736 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 SYN3O14994 580 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 MSI1O43347 362 aaKnown RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 UGT1A9O60656 530 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 PGAM1P18669 254 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 PGFP49763 221 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 BFSP2Q13515 415 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 ARHGEF6Q15052 776 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 STEAP4Q687X5 459 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 CGB2Q6NT52 195 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 SCD5Q86SK9 330 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 CEP57Q86XR8 500 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 NUP93Q8N1F7 819 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 DBF4BQ8NFT6 615 aa14.03□□□□□ -0.16
RBM39-216ENST00000444878 ZNF75CPQ92670 426 aaPredicted RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 CELF6Q96J87 481 aaKnown RBP14.03□□□□□ -0.16
RBM39-216ENST00000444878 VAT1Q99536 393 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms