RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 MUC6Q6W4X9 2439 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 C3orf70A6NLC5 250 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 B4GALT3O60512 393 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 RNASEH1O60930 286 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZBED1O96006 694 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ASS1P00966 412 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CALCAP01258 141 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SETSIPP0DME0 302 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 PROZP22891 400 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC5A3P53794 718 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 GCNT1Q02742 428 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 PPP1R15BQ5SWA1 713 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 HIBCHQ6NVY1 386 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DNAJC24Q6P3W2 148 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 PIGZQ86VD9 579 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 OR10T2Q8NGX3 314 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ZNF564Q8TBZ8 553 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SERPINB12Q96P63 405 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 NUP85Q9BW27 656 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CXCL16Q9H2A7 254 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 TBC1D17Q9HA65 648 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DNAJC17Q9NVM6 304 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DDIT4Q9NX09 232 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 GMIPQ9P107 970 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CHUKO15111 745 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 NDUFS2O75306 463 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATP6V1G2O95670 118 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DCNP07585 359 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DDX6P26196 483 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SDC4P31431 198 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 KCNJ1P48048 391 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC18A1P54219 525 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 MCOLN2Q8IZK6 566 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 CARNMT1Q8N4J0 409 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 FBXL6Q8N531 539 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 TSTD1Q8NFU3 115 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 RPRD1AQ96P16 312 aaPredicted RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 MYADMQ96S97 322 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 KCNK16Q96T55 309 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 FERMT1Q9BQL6 677 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 TACO1Q9BSH4 297 aaKnown RBP7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 DPEP3Q9H4B8 488 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 ADAM22Q9P0K1 906 aa7.62□□□□□ -1.19
CDC42BPA-208ENST00000442054 NEDD8-MDP1E9PL57 170 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLC34A2O95436 690 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SEC24AO95486 1093 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TTC4O95801 387 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 WARSP23381 471 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATP11AP98196 1134 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CSTF1Q05048 431 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SIGLEC14Q08ET2 396 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PDGFRLQ15198 375 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TAZQ16635 292 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SERPINA13PQ6UXR4 307 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRIM67Q6ZTA4 783 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MON1AQ86VX9 555 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TMEM130Q8N3G9 435 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SPATA18Q8TC71 538 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SUSD6Q92537 303 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 ATP2A3Q93084 1043 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 RUNDC3BQ96NL0 473 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 C11orf70Q9BRQ4 267 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 DHRS4Q9BTZ2 278 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MIR1-1HGQ9H1L0 117 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 OLA1Q9NTK5 396 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CTNNAL1Q9UBT7 734 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CACNA1GO43497 2377 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TPRP12270 2363 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 H0Y858 1186 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 HCRTO43612 131 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 C1QAP02745 245 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 FOXN2P32314 431 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PTPN7P35236 360 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PPP3CCP48454 512 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CCDC15Q0P6D6 951 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SFSWAPQ12872 951 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 SLMAPQ14BN4 828 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TANGO2Q6ICL3 276 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 PARM1Q6UWI2 310 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 RTL10Q7L3V2 364 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 HOOK3Q86VS8 718 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 OSTM1Q86WC4 334 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 UNC45BQ8IWX7 931 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CACNA2D3Q8IZS8 1091 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TTC9BQ8N6N2 239 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MAK16Q9BXY0 300 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TRIM31Q9BZY9 425 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MUC3BQ9H195 1237 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 EPHX3Q9H6B9 360 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 NINJ2Q9NZG7 142 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 CTTNBP2NLQ9P2B4 639 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 ACTL7BQ9Y614 415 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 COL4A4P53420 1690 aaPredicted RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 M0QZQ0 153 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 MDM4O15151 490 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 BMP1P13497 986 aa7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 WDR4P57081 412 aaKnown RBP7.61□□□□□ -1.19
CDC42BPA-208ENST00000442054 TBX4P57082 545 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms