RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 PCDHB2Q9Y5E7 798 aa4.39□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM110-MUSTN1A8MSY1 372 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CA12O43570 354 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCNDBP1O95273 360 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HNRNPCP07910 306 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 RARGP13631 454 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CD19P15391 556 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 GATA3P23771 443 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 BSGP35613 385 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 GPD2P43304 727 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PCP4P48539 62 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HSD17B7P56937 341 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TAS2R50P59544 299 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 UFM1P61960 85 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 RPS7P62081 194 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 FPGSQ05932 587 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 DCAF17Q5H9S7 520 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HECTD3Q5T447 861 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF648Q5T619 568 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 FOXR2Q6PJQ5 311 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PRPF39Q86UA1 669 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CAND1Q86VP6 1230 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 P3H2Q8IVL5 708 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 MAPKAPK5Q8IW41 473 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 FRMD1Q8N878 549 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCTD6Q8NC69 237 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PRR11Q96HE9 360 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CNDP2Q96KP4 475 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 SPAG5Q96R06 1193 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 OSBPL9Q96SU4 736 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TEX101Q9BY14 249 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 MSL2Q9HCI7 577 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HOXC10Q9NYD6 342 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZHX1Q9UKY1 873 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PASKQ96RG2 1323 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 ARHGEF11O15085 1522 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM232C9JQI7 657 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CYP3A4P08684 503 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC175P0C221 793 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 IL4RP24394 825 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 GCH1P30793 250 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PSMB10P40306 273 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 EIF2DP41214 584 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TXKP42681 527 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 KRT83P78385 493 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CAP1Q01518 475 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 MECOMQ03112 1051 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CDK18Q07002 472 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM29Q14134 588 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TMEM266Q2M3C6 531 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 SLC9B1Q4ZJI4 515 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 RUNDC3AQ59EK9 446 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC158Q5M9N0 1113 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 SH2D4BQ5SQS7 431 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 OTUD6AQ7L8S5 288 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PLEKHH3Q7Z736 793 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 TAX1BP1Q86VP1 789 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 PLD5Q8N7P1 536 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZNF366Q8N895 744 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CD180Q99467 661 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HTATIP2Q9BUP3 242 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 CCDC177Q9NQR7 707 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 THAP1Q9NVV9 213 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 HCN3Q9P1Z3 774 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 RABL2AQ9UBK7 228 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCNE2Q9Y6J6 123 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 IKBKGQ9Y6K9 419 aa4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 ZCCHC6Q5VYS8 1495 aaKnown RBP4.38□□□□□ -1.71
CDC42BPA-207ENST00000441725 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 A0A1W2PQ09 198 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TEX22C9J3V5 150 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TNNT1P13805 278 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 CXCR5P32302 372 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 CTNNA1P35221 906 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 RPS19P39019 145 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 PBX3P40426 434 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 AFF3P51826 1226 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 RABGGTBP53611 331 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 JAG1P78504 1218 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 DEUP1Q05D60 604 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 FOXL1Q12952 345 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 EIF2B5Q13144 721 aaKnown RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 B3GNTL1Q67FW5 361 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 CYP20A1Q6UW02 462 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 LRRC55Q6ZSA7 311 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 MIGA1Q8NAN2 632 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GIMAP1Q8WWP7 306 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 KCNJ9Q92806 393 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 GLG1Q92896 1179 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 DPCDQ9BVM2 203 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 ACTRT3Q9BYD9 372 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TPSD1Q9BZJ3 242 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 TRIM6Q9C030 488 aaPredicted RBP4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 AMBRA1Q9C0C7 1298 aa4.37□□□□□ -1.71
CDC42BPA-207ENST00000441725 PDE7BQ9NP56 450 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms