RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PSMB4P28070 264 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 FAAP100Q0VG06 881 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 EFTUD2Q15029 972 aaKnown RBP eCLIP13.53□□□□□ -0.243e-13■■■■□ 21.2
CPSF4-206ENST00000441580 TCTN1Q2MV58 587 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 STEAP4Q687X5 459 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 NUGGCQ68CJ6 796 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF449Q6P9G9 518 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 LRRC49Q8IUZ0 686 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 ANKLE1Q8NAG6 615 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 MDM1Q8TC05 714 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 SLC44A1Q8WWI5 657 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 STAMBPL1Q96FJ0 436 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 CCT8L2Q96SF2 557 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 SEPT5Q99719 369 aaPredicted RBP13.53□□□□□ -0.24
CPSF4-206ENST00000441580 EBNA1BP2Q99848 306 aaKnown RBP13.53□□□□□ -0.24
CPSF4-206ENST00000441580 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 NMUR1Q9HB89 426 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 KCNK9Q9NPC2 374 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 MTRRQ9UBK8 725 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 RSPH14Q9UHP6 348 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 ZNF180Q9UJW8 692 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
CPSF4-206ENST00000441580 WASH4PA8MWX3 477 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 KCNU1A8MYU2 1149 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PSMD3O43242 534 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 EFCAB14O75071 495 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 ZWINTO95229 277 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 AP2A1O95782 977 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PGAM1P18669 254 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 DNAJB2P25686 324 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 GPR15P49685 360 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 KPNA1P52294 538 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 ATN1P54259 1190 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 CCL23P55773 120 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 HNRNPH2P55795 449 aaKnown RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TBX4P57082 545 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 HTRA3P83110 453 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TLE2Q04725 743 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 IKBKEQ14164 716 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PRPSAP1Q14558 356 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TRIP4Q15650 581 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 DDR2Q16832 855 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 USP41Q3LFD5 358 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 MGAT5BQ3V5L5 792 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 RTP2Q5QGT7 225 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 GKAP1Q5VSY0 366 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TIGD7Q6NT04 549 aaPredicted RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 RWDD4Q6NW29 188 aaKnown RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 CYP4X1Q8N118 509 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 CCDC33Q8N5R6 958 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 RTL3Q8N8U3 475 aaKnown RBP13.52□□□□□ -0.25
CPSF4-206ENST00000441580 ATP6V0D2Q8N8Y2 350 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 ANKRD42Q8N9B4 389 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PDZD8Q8NEN9 1154 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 DCAKDQ8WVC6 231 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 SLC39A13Q96H72 371 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PGLYRP2Q96PD5 576 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TSGA13Q96PP4 275 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 TTLL2Q9BWV7 592 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 HSFX1Q9UBD0 423 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 PCDHA11Q9Y5I1 949 aa13.52□□□□□ -0.25
CPSF4-206ENST00000441580 GREB1Q4ZG55 1949 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 E9PAM4 449 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SUN1O94901 812 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 AMHP03971 560 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 CLTBP09497 229 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 CCNCP24863 283 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 ALDH7A1P49419 539 aaKnown RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SERPINB9P50453 376 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SEC24CP53992 1094 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 ARPP19P56211 112 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 IL9RQ01113 521 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SPARCL1Q14515 664 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 PSMD5Q16401 504 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 PKN2Q16513 984 aaKnown RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 KBTBD12Q3ZCT8 623 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 LGSNQ5TDP6 509 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SLC8B1Q6J4K2 584 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 UNC5AQ6ZN44 842 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 CYS1Q717R9 158 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SLC26A11Q86WA9 606 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 LRRC6Q86X45 466 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 IGDCC3Q8IVU1 814 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 RNF168Q8IYW5 571 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 ATAD1Q8NBU5 361 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 CDKL2Q92772 493 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 MTBPQ96DY7 904 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 FCRL2Q96LA5 508 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SIGLEC10Q96LC7 697 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 C1orf74Q96LT6 269 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 ZNF317Q96PQ6 595 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 PRMT1Q99873 361 aaKnown RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 LRRC40Q9H9A6 602 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SAMD15Q9P1V8 674 aa13.51□□□□□ -0.25
CPSF4-206ENST00000441580 PPARGC1AQ9UBK2 798 aaKnown RBP13.51□□□□□ -0.25
CPSF4-206ENST00000441580 SFMBT1Q9UHJ3 866 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms