RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PDE11AQ9HCR9 933 aa5.48□□□□□ -1.53
PFDN4-202ENST00000441080 PDGFCQ9NRA1 345 aa5.48□□□□□ -1.53
PFDN4-202ENST00000441080 ADARB2Q9NS39 739 aaKnown RBP5.48□□□□□ -1.53
PFDN4-202ENST00000441080 FLRT1Q9NZU1 646 aa5.48□□□□□ -1.53
PFDN4-202ENST00000441080 KLHL13Q9P2N7 655 aa5.48□□□□□ -1.53
PFDN4-202ENST00000441080 EMSYQ7Z589 1322 aa5.48□□□□□ -1.53
PFDN4-202ENST00000441080 PPP6CO00743 305 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 SEPT4O43236 478 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 CREB3O43889 395 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 PLAUP00749 431 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 RFPL3SP0C7P2 107 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 ST6GAL1P15907 406 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 TGM2P21980 687 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 EPHB2P29323 1055 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 MTA1Q13330 715 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 DCTN1Q14203 1278 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 ANO7Q6IWH7 933 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 SYCE2Q6PIF2 218 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 KIAA1324Q6UXG2 1013 aaKnown RBP5.47□□□□□ -1.53
PFDN4-202ENST00000441080 RBM44Q6ZP01 1051 aaKnown RBP5.47□□□□□ -1.53
PFDN4-202ENST00000441080 RHPN2Q8IUC4 686 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 GALNT16Q8N428 558 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 CEP70Q8NHQ1 597 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 GATA5Q9BWX5 397 aaPredicted RBP5.47□□□□□ -1.53
PFDN4-202ENST00000441080 OSBPL5Q9H0X9 879 aaPredicted RBP5.47□□□□□ -1.53
PFDN4-202ENST00000441080 RCE1Q9Y256 329 aa5.47□□□□□ -1.53
PFDN4-202ENST00000441080 GRM8O00222 908 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 EIF3FO00303 357 aaPredicted RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 USP12O75317 370 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 AKR1A1P14550 325 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 RPS6KB1P23443 525 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 SOX2P48431 317 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 B4GALNT1Q00973 533 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 TAF12Q16514 161 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 LRRC24Q50LG9 513 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 MEX3CQ5U5Q3 659 aaKnown RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 RASGRP2Q7LDG7 609 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 HERC6Q8IVU3 1022 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 PTGR2Q8N8N7 351 aaPredicted RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 KAT2BQ92831 832 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 ARRDC3Q96B67 414 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 KTI12Q96EK9 354 aaPredicted RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 NPAS1Q99742 590 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 PLEKHA2Q9HB19 425 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 ERVK-5Q9HDB9 667 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 DERAQ9Y315 318 aa5.46□□□□□ -1.54
PFDN4-202ENST00000441080 RRP7AQ9Y3A4 280 aaKnown RBP5.46□□□□□ -1.54
PFDN4-202ENST00000441080 NPHP1O15259 732 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 SGPL1O95470 568 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 CHN1P15882 459 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 HOXA7P31268 230 aaPredicted RBP5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ARHGAP25P42331 645 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 HSF1Q00613 529 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 CDK18Q07002 472 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 EFR3AQ14156 821 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 GPR162Q16538 588 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ZNF474Q6S9Z5 364 aaPredicted RBP5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ANKS1BQ7Z6G8 1248 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 CNGA4Q8IV77 575 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ENDOVQ8N8Q3 282 aaKnown RBP5.45□□□□□ -1.54
PFDN4-202ENST00000441080 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ZFPM2Q8WW38 1151 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 COG8Q96MW5 612 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 ARHGAP39Q9C0H5 1083 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 CLPBQ9H078 707 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 RMI1Q9H9A7 625 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 MLXIPLQ9NP71 852 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 RASSF1Q9NS23 344 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
PFDN4-202ENST00000441080 MTMR4Q9NYA4 1195 aa5.45□□□□□ -1.54
PFDN4-202ENST00000441080 SMIM35A0A1B0GVV1 85 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SLC22A23A1A5C7 686 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 STX16-NPEPL1H3BU86 382 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 MASP2O00187 686 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 STX16O14662 325 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 CD63P08962 238 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 MAPK9P45984 424 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 GHRHRQ02643 423 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SRSF4Q08170 494 aaKnown RBP5.44□□□□□ -1.54
PFDN4-202ENST00000441080 ZNF484Q5JVG2 852 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 LIPMQ5VYY2 423 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 KIAA1614Q5VZ46 1190 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SLC18B1Q6NT16 456 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 CYP26C1Q6V0L0 522 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 YTHDF3Q7Z739 585 aaKnown RBP5.44□□□□□ -1.54
PFDN4-202ENST00000441080 CERS3Q8IU89 383 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 ATP2A3Q93084 1043 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 UBXN10Q96LJ8 280 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 ZNF347Q96SE7 839 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 QTRT1Q9BXR0 403 aaKnown RBP5.44□□□□□ -1.54
PFDN4-202ENST00000441080 CHMP4AQ9BY43 222 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.44□□□□□ -1.54
PFDN4-202ENST00000441080 NOD2Q9HC29 1040 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SAGE1Q9NXZ1 904 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 RRN3Q9NYV6 651 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SLC25A13Q9UJS0 675 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 SLC8A2Q9UPR5 921 aa5.44□□□□□ -1.54
PFDN4-202ENST00000441080 C2CD4BA6NLJ0 364 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms